BLASTX nr result

ID: Cnidium21_contig00027910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027910
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF95185.1| cyclic nucleotide gated channel [Malus x domestica]   128   6e-28
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   116   2e-24
ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...   114   6e-24
gb|AFK49438.1| unknown [Lotus japonicus]                              114   1e-23
ref|XP_002883080.1| cyclic nucleotide-binding transporter 1 [Ara...   112   4e-23

>dbj|BAF95185.1| cyclic nucleotide gated channel [Malus x domestica]
          Length = 632

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/108 (58%), Positives = 82/108 (75%)
 Frame = +3

Query: 3   ESIGEDNKVIHLSVGGVCGEELIELCLKHSSVNRDGKRIRIPGHKLLSNRMVRCLTNVEA 182
           ESIGED   I LS G VCGEEL+  CL+HSSVN+DGK+IRIPG +LLSNRMVRCLTNVEA
Sbjct: 494 ESIGEDGNRISLSEGDVCGEELLAWCLEHSSVNKDGKKIRIPGQRLLSNRMVRCLTNVEA 553

Query: 183 YTLQVADLVEVTRLFSWRLFKNPQIQGAINNVSPHLQRSVRNPVKLSW 326
           ++L+ AD+ EVT +FS R  + P++QGAI   SP+ +      ++++W
Sbjct: 554 FSLRAADIEEVTSVFS-RFLRKPRVQGAIRYESPYWRGLAARCIQVAW 600


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 772

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/108 (50%), Positives = 79/108 (73%)
 Frame = +3

Query: 3   ESIGEDNKVIHLSVGGVCGEELIELCLKHSSVNRDGKRIRIPGHKLLSNRMVRCLTNVEA 182
           ES G+D  ++ LS G  CGEEL+   L+HSSV+ DGK++R+ G +LLSNR VRCLTNVEA
Sbjct: 645 ESFGDDGTMVPLSEGDACGEELLTWYLEHSSVSTDGKKVRVQGQRLLSNRTVRCLTNVEA 704

Query: 183 YTLQVADLVEVTRLFSWRLFKNPQIQGAINNVSPHLQRSVRNPVKLSW 326
           ++L+ ADL E+T LF+ R  +NP +QGA+  VSP+ +    N ++++W
Sbjct: 705 FSLRAADLEELTILFT-RFLRNPHVQGALRYVSPYWRSLAANRIQVAW 751


>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 770

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/108 (49%), Positives = 77/108 (71%)
 Frame = +3

Query: 3   ESIGEDNKVIHLSVGGVCGEELIELCLKHSSVNRDGKRIRIPGHKLLSNRMVRCLTNVEA 182
           ES G+D  ++ LS G  CGEEL+   L+HSSV+ DGK++R+ G + LSNR +RCLTNVEA
Sbjct: 643 ESFGDDGTIVPLSEGDACGEELLTWYLEHSSVSTDGKKLRVQGQRFLSNRTIRCLTNVEA 702

Query: 183 YTLQVADLVEVTRLFSWRLFKNPQIQGAINNVSPHLQRSVRNPVKLSW 326
           ++L  ADL E+T LF+ R  +NP + GA+ NVSP+ +    N ++++W
Sbjct: 703 FSLHAADLEELTILFT-RFLRNPHVLGALRNVSPYWRSLAANRIQVAW 749


>gb|AFK49438.1| unknown [Lotus japonicus]
          Length = 197

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/108 (50%), Positives = 79/108 (73%)
 Frame = +3

Query: 3   ESIGEDNKVIHLSVGGVCGEELIELCLKHSSVNRDGKRIRIPGHKLLSNRMVRCLTNVEA 182
           ESIGED   + LS G  CGEEL+   L+HSSV+ DG+++R+PG +L+SNR V+CLTNVEA
Sbjct: 73  ESIGEDGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVKCLTNVEA 132

Query: 183 YTLQVADLVEVTRLFSWRLFKNPQIQGAINNVSPHLQRSVRNPVKLSW 326
           ++L  ADL EVT LF+ R  ++PQ+QGA+   SP+ +    N ++++W
Sbjct: 133 FSLSAADLEEVTILFT-RFLRSPQVQGALRYESPYWRSLAANRIQVAW 179


>ref|XP_002883080.1| cyclic nucleotide-binding transporter 1 [Arabidopsis lyrata subsp.
           lyrata] gi|297328920|gb|EFH59339.1| cyclic
           nucleotide-binding transporter 1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 767

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/108 (53%), Positives = 76/108 (70%)
 Frame = +3

Query: 3   ESIGEDNKVIHLSVGGVCGEELIELCLKHSSVNRDGKRIRIPGHKLLSNRMVRCLTNVEA 182
           ESIGED  V+ L  G VCGEEL+  CL+ SSVN DG RIR+P   LLSNR VRC+TNVEA
Sbjct: 642 ESIGEDGSVLPLYEGDVCGEELLTWCLERSSVNPDGTRIRMPSKGLLSNRNVRCVTNVEA 701

Query: 183 YTLQVADLVEVTRLFSWRLFKNPQIQGAINNVSPHLQRSVRNPVKLSW 326
           ++L VADL +VT LFS R  ++ ++QGAI   SP+ +      ++++W
Sbjct: 702 FSLSVADLEDVTSLFS-RFLRSHRVQGAIRYDSPYWRLRAARQIQVAW 748


Top