BLASTX nr result

ID: Cnidium21_contig00027883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027883
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878388.1| hypothetical protein ARALYDRAFT_486638 [Arab...   208   4e-52
ref|NP_182135.1| ketopantoate hydroxymethyltransferase 1 [Arabid...   202   2e-50
ref|NP_191712.1| Phosphoenolpyruvate carboxylase family protein ...   200   9e-50
ref|XP_004139651.1| PREDICTED: 3-methyl-2-oxobutanoate hydroxyme...   197   9e-49
ref|XP_002882051.1| KPHMT1/PANB1 [Arabidopsis lyrata subsp. lyra...   196   1e-48

>ref|XP_002878388.1| hypothetical protein ARALYDRAFT_486638 [Arabidopsis lyrata subsp.
           lyrata] gi|297324226|gb|EFH54647.1| hypothetical protein
           ARALYDRAFT_486638 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  208 bits (529), Expect = 4e-52
 Identities = 101/127 (79%), Positives = 116/127 (91%)
 Frame = -3

Query: 381 MASSLISKPHKALSLLSTAVRCMSNIPENTVYGGPKSQSPNQRVTLTQLRQKHRKGEPIT 202
           MA+SL+    +A   ++T VR MSN+PENTVYGGPKSQ+PNQRVTLTQLRQKHRKGEPIT
Sbjct: 1   MAASLVRSCSRASRAITT-VRFMSNVPENTVYGGPKSQNPNQRVTLTQLRQKHRKGEPIT 59

Query: 201 MVTAYDYPSAVHLDNAGIDIALVGDSASMVVHGHDTTLPITVDQMLVHCRSVARGAKRPL 22
           MVTAYDYPSAVH+D AGID+ LVGDSA+MVVHG+DTTLPI++D+MLVHCR+VARGAKRPL
Sbjct: 60  MVTAYDYPSAVHIDTAGIDVCLVGDSAAMVVHGYDTTLPISLDEMLVHCRAVARGAKRPL 119

Query: 21  LVGDLPF 1
           LVGDLPF
Sbjct: 120 LVGDLPF 126


>ref|NP_182135.1| ketopantoate hydroxymethyltransferase 1 [Arabidopsis thaliana]
           gi|3702336|gb|AAC62893.1| 3-methyl-2-oxobutanoate
           hydroxy-methyl-transferase [Arabidopsis thaliana]
           gi|28466955|gb|AAO44086.1| At2g46110 [Arabidopsis
           thaliana] gi|110735692|dbj|BAE99826.1|
           3-methyl-2-oxobutanoate hydroxy-methyl-transferase
           [Arabidopsis thaliana] gi|330255551|gb|AEC10645.1|
           ketopantoate hydroxymethyltransferase 1 [Arabidopsis
           thaliana]
          Length = 347

 Score =  202 bits (514), Expect = 2e-50
 Identities = 103/130 (79%), Positives = 114/130 (87%), Gaps = 3/130 (2%)
 Frame = -3

Query: 381 MASSLI---SKPHKALSLLSTAVRCMSNIPENTVYGGPKSQSPNQRVTLTQLRQKHRKGE 211
           MASSL    S+  KA+S     VR MSN+PENTVYGGPK Q+PNQRVTLT LRQKHR+GE
Sbjct: 1   MASSLTRNCSRFSKAIS-----VRFMSNLPENTVYGGPKPQNPNQRVTLTHLRQKHRRGE 55

Query: 210 PITMVTAYDYPSAVHLDNAGIDIALVGDSASMVVHGHDTTLPITVDQMLVHCRSVARGAK 31
           PIT+VTAYDYPSAVHLD AGID+ LVGDSASMVVHGHDTTLPI++D+MLVHCR+VARGAK
Sbjct: 56  PITVVTAYDYPSAVHLDTAGIDVCLVGDSASMVVHGHDTTLPISLDEMLVHCRAVARGAK 115

Query: 30  RPLLVGDLPF 1
           RPLLVGDLPF
Sbjct: 116 RPLLVGDLPF 125


>ref|NP_191712.1| Phosphoenolpyruvate carboxylase family protein [Arabidopsis
           thaliana] gi|42572757|ref|NP_974474.1|
           Phosphoenolpyruvate carboxylase family protein
           [Arabidopsis thaliana] gi|6850844|emb|CAB71083.1|
           3-methyl-2-oxobutanoate hydroxy-methyl-transferase-like
           protein [Arabidopsis thaliana]
           gi|21593121|gb|AAM65070.1| 3-methyl-2-oxobutanoate
           hydroxy-methyl-transferase-like protein [Arabidopsis
           thaliana] gi|94442441|gb|ABF19008.1| At3g61530
           [Arabidopsis thaliana] gi|332646697|gb|AEE80218.1|
           Phosphoenolpyruvate carboxylase family protein
           [Arabidopsis thaliana] gi|332646698|gb|AEE80219.1|
           Phosphoenolpyruvate carboxylase family protein
           [Arabidopsis thaliana]
          Length = 354

 Score =  200 bits (509), Expect = 9e-50
 Identities = 97/127 (76%), Positives = 111/127 (87%)
 Frame = -3

Query: 381 MASSLISKPHKALSLLSTAVRCMSNIPENTVYGGPKSQSPNQRVTLTQLRQKHRKGEPIT 202
           MA+SL+       S   T VR MSN+PE+TVYGGPK Q+ NQRVTLTQLRQKHRKGEPIT
Sbjct: 1   MAASLVRSCCSRASRAITTVRFMSNVPEDTVYGGPKPQNSNQRVTLTQLRQKHRKGEPIT 60

Query: 201 MVTAYDYPSAVHLDNAGIDIALVGDSASMVVHGHDTTLPITVDQMLVHCRSVARGAKRPL 22
           MVTAYDYPSAVH+D AGID+ LVGDSA+MVVHG+DTTLPI++++MLVHCR+VARGAKRPL
Sbjct: 61  MVTAYDYPSAVHIDTAGIDVCLVGDSAAMVVHGYDTTLPISLEEMLVHCRAVARGAKRPL 120

Query: 21  LVGDLPF 1
           LVGDLPF
Sbjct: 121 LVGDLPF 127


>ref|XP_004139651.1| PREDICTED: 3-methyl-2-oxobutanoate hydroxymethyltransferase-like
           [Cucumis sativus] gi|449475405|ref|XP_004154444.1|
           PREDICTED: 3-methyl-2-oxobutanoate
           hydroxymethyltransferase-like [Cucumis sativus]
          Length = 347

 Score =  197 bits (500), Expect = 9e-49
 Identities = 95/114 (83%), Positives = 107/114 (93%)
 Frame = -3

Query: 342 SLLSTAVRCMSNIPENTVYGGPKSQSPNQRVTLTQLRQKHRKGEPITMVTAYDYPSAVHL 163
           SLL T +R MSN+PENTVYGGP SQ+PNQRVTLT LRQK++KGEPITMVTAYDYPS VHL
Sbjct: 18  SLLKT-LRYMSNVPENTVYGGPTSQTPNQRVTLTNLRQKYKKGEPITMVTAYDYPSGVHL 76

Query: 162 DNAGIDIALVGDSASMVVHGHDTTLPITVDQMLVHCRSVARGAKRPLLVGDLPF 1
           D AGIDIALVGDSA+MVVHGHDTTLPIT+D++LVHCR+VARGA+RPLL+GDLPF
Sbjct: 77  DMAGIDIALVGDSAAMVVHGHDTTLPITLDEILVHCRAVARGARRPLLIGDLPF 130


>ref|XP_002882051.1| KPHMT1/PANB1 [Arabidopsis lyrata subsp. lyrata]
           gi|297327890|gb|EFH58310.1| KPHMT1/PANB1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 346

 Score =  196 bits (499), Expect = 1e-48
 Identities = 103/130 (79%), Positives = 113/130 (86%), Gaps = 4/130 (3%)
 Frame = -3

Query: 381 MASSLI---SKPHKALSLLSTAVRCMSNIPENTVYGGPKSQSPNQRVTLTQLRQKHRKGE 211
           MASSL    S+  KA+S     VR MSN+PENTVYGGPK Q+PNQRVTLT LRQKHRKGE
Sbjct: 1   MASSLTRNCSRFSKAIS-----VRFMSNLPENTVYGGPKPQNPNQRVTLTHLRQKHRKGE 55

Query: 210 PITMVTAYDYPSAVHLDN-AGIDIALVGDSASMVVHGHDTTLPITVDQMLVHCRSVARGA 34
           PIT+VTAYDYPSAVHLD  AGID+ LVGDSASMVVHGHDTTLPI++D+MLVHCR+VARGA
Sbjct: 56  PITVVTAYDYPSAVHLDTAAGIDVCLVGDSASMVVHGHDTTLPISLDEMLVHCRAVARGA 115

Query: 33  KRPLLVGDLP 4
           KRPLLVGDLP
Sbjct: 116 KRPLLVGDLP 125


Top