BLASTX nr result

ID: Cnidium21_contig00027874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027874
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24866.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855...   139   3e-31
ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago ...   117   1e-24

>emb|CBI24866.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  139 bits (349), Expect = 3e-31
 Identities = 74/135 (54%), Positives = 92/135 (68%)
 Frame = +3

Query: 3   KGMVKDAVETPPLRSVVTANINVDEDAHMKINHFKRSSPPRPIGQRKRRRPDEKLHIKKD 182
           KG+ +D  E PPLRS    ++  +E  H K+ H KRS  P+   Q+KR RPD+    K++
Sbjct: 136 KGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSLSPKHPNQKKRNRPDDLKQAKRE 195

Query: 183 DVSKTIINAPRRLLQSAVRDALGSPRSARLSTEPSFKRLRSVVSTSVEDSSLEDRTQSLQ 362
            VS+  INAPRRLLQ AVRDA+ + R + L+ EP  KRLRSVVSTS  DSSL+DR Q LQ
Sbjct: 196 VVSQATINAPRRLLQFAVRDAVATSRPSNLAAEPKLKRLRSVVSTSTGDSSLDDRPQRLQ 255

Query: 363 SVARVPDATMAVAIK 407
           SVAR+P A MA AIK
Sbjct: 256 SVARMPSA-MATAIK 269


>ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
          Length = 700

 Score =  139 bits (349), Expect = 3e-31
 Identities = 74/135 (54%), Positives = 92/135 (68%)
 Frame = +3

Query: 3   KGMVKDAVETPPLRSVVTANINVDEDAHMKINHFKRSSPPRPIGQRKRRRPDEKLHIKKD 182
           KG+ +D  E PPLRS    ++  +E  H K+ H KRS  P+   Q+KR RPD+    K++
Sbjct: 142 KGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSLSPKHPNQKKRNRPDDLKQAKRE 201

Query: 183 DVSKTIINAPRRLLQSAVRDALGSPRSARLSTEPSFKRLRSVVSTSVEDSSLEDRTQSLQ 362
            VS+  INAPRRLLQ AVRDA+ + R + L+ EP  KRLRSVVSTS  DSSL+DR Q LQ
Sbjct: 202 VVSQATINAPRRLLQFAVRDAVATSRPSNLAAEPKLKRLRSVVSTSTGDSSLDDRPQRLQ 261

Query: 363 SVARVPDATMAVAIK 407
           SVAR+P A MA AIK
Sbjct: 262 SVARMPSA-MATAIK 275


>ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|222849699|gb|EEE87246.1|
           predicted protein [Populus trichocarpa]
          Length = 762

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/135 (51%), Positives = 95/135 (70%)
 Frame = +3

Query: 3   KGMVKDAVETPPLRSVVTANINVDEDAHMKINHFKRSSPPRPIGQRKRRRPDEKLHIKKD 182
           KG+V+D    PPLRS V  NI+ +E  H +++H +RS+ P+P  Q+KR + DE+ H+K+D
Sbjct: 180 KGVVRDVNHRPPLRSSVVVNIHQEEKTHCEVSHARRSTSPQPPQQKKRSQHDERQHVKRD 239

Query: 183 DVSKTIINAPRRLLQSAVRDALGSPRSARLSTEPSFKRLRSVVSTSVEDSSLEDRTQSLQ 362
            VS+    APRRLLQ AVRDA+ + R + +  EP  KRLRSVVSTS ED+SL DR + LQ
Sbjct: 240 TVSQATSRAPRRLLQFAVRDAVRTLRPSGMVKEPLLKRLRSVVSTSTEDTSLVDRPRRLQ 299

Query: 363 SVARVPDATMAVAIK 407
           S+ARVP+  MA  +K
Sbjct: 300 SIARVPN-PMATVLK 313


>ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|222847209|gb|EEE84756.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  120 bits (301), Expect = 1e-25
 Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   KGMVKDAVETPPLRSVVTANINVDEDAHMKINHFKRSSPPRPIGQRKRRRPDEKLHIK-K 179
           KG+ +D  + PPLRS V  NI+++E  H K +  +RS  P+P  ++KR R DE+ H+K +
Sbjct: 139 KGVARDVNQPPPLRSSVVDNIHLEEKTHGKASRARRSPSPQPPQEQKRSRHDEQQHVKQR 198

Query: 180 DDVSKTIINAPRRLLQSAVRDALGSPRSARLSTEPSFKRLRSVVSTSVEDSSLEDRTQSL 359
           D VS+    APRRLLQ AVRDA+ + R +    EPS KRLRSVVS S ED+SL DR + L
Sbjct: 199 DAVSQATSGAPRRLLQFAVRDAVRTLRPSGSVKEPSRKRLRSVVSASTEDTSLVDRPRRL 258

Query: 360 QSVARVPDATMAVAIK 407
           QS+ARVP+  MA  +K
Sbjct: 259 QSIARVPN-PMATVLK 273


>ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
           gi|355488171|gb|AES69374.1| Polyadenylate-binding
           protein 2-A [Medicago truncatula]
          Length = 685

 Score =  117 bits (292), Expect = 1e-24
 Identities = 69/137 (50%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
 Frame = +3

Query: 3   KGMVKDAVETPPLRSVVTANINVDEDAHMKINHFKRSSPPRPIGQRKRRRPDEKLHIKKD 182
           KG+VK   E P +RS    N +V+E     +N  +RS  P+P  QRKR R DE+   K+D
Sbjct: 143 KGLVKGEAEAPTIRSFEVDNAHVEEKVRSNVNRSRRSPSPKPAVQRKRGRADEQQRPKRD 202

Query: 183 DVSKTIINAPRRLLQSAVRDALGSPRSARLST--EPSFKRLRSVVSTSVEDSSLEDRTQS 356
            VS+  I APRRLLQ AVRDA+GSPR++ + T  EP  KRLRSVVSTS  DSS+ +  Q 
Sbjct: 203 VVSQVNIAAPRRLLQFAVRDAVGSPRTSGVGTSVEPYLKRLRSVVSTSSADSSVVEHYQR 262

Query: 357 LQSVARVPDATMAVAIK 407
           +Q  +R P+A MA  IK
Sbjct: 263 VQPTSRAPNA-MARVIK 278


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