BLASTX nr result

ID: Cnidium21_contig00027867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027867
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530316.1| zinc finger protein, putative [Ricinus commu...   134   1e-29
ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002530314.1| zinc finger protein, putative [Ricinus commu...   119   3e-25
ref|XP_003632093.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   116   2e-24

>ref|XP_002530316.1| zinc finger protein, putative [Ricinus communis]
           gi|223530172|gb|EEF32083.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 255

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/118 (55%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
 Frame = +1

Query: 4   MGNTQQRATENP--QENEQEDG--SIMTCEICIEPICLPNKKFKNQEKCGHPFCVDCIIK 171
           MGN  Q+  E    +E+EQ++   S  TCEICIEP+ L NKKF+N   C HPFC+DCI K
Sbjct: 1   MGNKLQKPQETNVVEEHEQKEEVVSSFTCEICIEPM-LSNKKFENASLCTHPFCLDCISK 59

Query: 172 YIEVKIDDRVCEIKCPALSCDHFLDPFFVRPFIGPHVFDKWCDLLCENAVLGFERCYC 345
           Y+EVK++  +  IKCP  SC H LDP   R  I   VFDKWCDLLC++ V G ERCYC
Sbjct: 60  YVEVKVEGFIGNIKCPGTSCKHPLDPLSCRSIISKPVFDKWCDLLCDSVVSGVERCYC 117


>ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|222862913|gb|EEF00420.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/118 (47%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
 Frame = +1

Query: 4   MGNTQQRA----TENPQENEQEDGSIMTCEICIEPICLPNKKFKNQEKCGHPFCVDCIIK 171
           MGNT Q+      E  ++ +QE+ S  TCEIC +P+ L  + FKN   C HPFC+DCI K
Sbjct: 1   MGNTMQKPQGTEVEGTEQLQQEEDSNFTCEICSDPM-LSTRNFKNGIVCKHPFCLDCITK 59

Query: 172 YIEVKIDDRVCEIKCPALSCDHFLDPFFVRPFIGPHVFDKWCDLLCENAVLGFERCYC 345
           YIE+ +++    I+CP L+C   LDP   RP I   +F+KWCD LC++ VLG E CYC
Sbjct: 60  YIEITVEETSGCIECPGLNCKQLLDPLSCRPIISKPIFEKWCDRLCDSMVLGSESCYC 117


>ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|222835680|gb|EEE74115.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/118 (50%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
 Frame = +1

Query: 4   MGNTQQRATENPQEN----EQEDGSIMTCEICIEPICLPNKKFKNQEKCGHPFCVDCIIK 171
           MGNT Q++ E   E      QE+ S  TCEIC EP+ L  +KFKN   C HPFC+DCI K
Sbjct: 1   MGNTMQKSEETKVEEPGLLRQEEDSNFTCEICTEPM-LAIRKFKNGSLCKHPFCLDCIAK 59

Query: 172 YIEVKIDDRVCEIKCPALSCDHFLDPFFVRPFIGPHVFDKWCDLLCENAVLGFERCYC 345
           YIEV +++    I+CP L+C   LDP   R  I   +F+KWCD LC++ VLG E CYC
Sbjct: 60  YIEVTVEESTGCIECPGLNCKQPLDPLSCRRIISKPIFEKWCDHLCDSTVLGSESCYC 117


>ref|XP_002530314.1| zinc finger protein, putative [Ricinus communis]
           gi|223530170|gb|EEF32081.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 213

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/91 (60%), Positives = 62/91 (68%)
 Frame = +1

Query: 73  TCEICIEPICLPNKKFKNQEKCGHPFCVDCIIKYIEVKIDDRVCEIKCPALSCDHFLDPF 252
           TCEICIEP  L N+KFKN   C HPFC DCI KY+EVK+ D V  IKCP+L CD  L+P 
Sbjct: 8   TCEICIEPT-LSNRKFKNGNGCTHPFCNDCIAKYVEVKVIDNVANIKCPSLGCDRPLEPT 66

Query: 253 FVRPFIGPHVFDKWCDLLCENAVLGFERCYC 345
                I   +FDKW DLLCE  VL +ERCYC
Sbjct: 67  SCMALIPKAIFDKWSDLLCEVRVLEWERCYC 97


>ref|XP_003632093.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase RNF144A-like [Vitis vinifera]
          Length = 212

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = +1

Query: 40  QENEQEDGSIMTCEICIEPICLPNKKFKNQEKCGHPFCVDCIIKYIEVKIDDR-VCEIKC 216
           ++ E++D S + CEICIEPI   NKKFKN   C H FC+DC+  YI+VK++D  V ++ C
Sbjct: 17  EDEEEDDDSTLACEICIEPIS-SNKKFKNNHNCTHSFCMDCMASYIQVKVEDXYVPDVAC 75

Query: 217 PALSCDHFLDPFFVRPFIGPHVFDKWCDLLCENAV-LGFERCY 342
           PAL C H L+P    P +   +F KW DLLC+  V LGFERCY
Sbjct: 76  PALDCGHLLNPLHYLPILPATLFTKWSDLLCKKVVLLGFERCY 118


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