BLASTX nr result

ID: Cnidium21_contig00027833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027833
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like...    69   3e-10
ref|NP_001241576.1| uncharacterized protein LOC100794355 [Glycin...    68   9e-10
ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch...    65   6e-09
gb|AFK38264.1| unknown [Medicago truncatula]                           65   6e-09

>ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 217

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = -3

Query: 300 AKDLVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 187
           AKDLVEK PAV KKGVSKEEGEQIIEK+KALGAKVVME
Sbjct: 180 AKDLVEKTPAVIKKGVSKEEGEQIIEKLKALGAKVVME 217


>ref|NP_001241576.1| uncharacterized protein LOC100794355 [Glycine max]
           gi|255646953|gb|ACU23946.1| unknown [Glycine max]
          Length = 216

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -3

Query: 300 AKDLVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 187
           AKDLVEK P+V KKG+SKEEGEQIIEK+KALGAKVVME
Sbjct: 179 AKDLVEKTPSVIKKGISKEEGEQIIEKLKALGAKVVME 216


>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -3

Query: 300 AKDLVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 187
           AKDLVEK P+V KKGVSKEEGEQIIEKMKA+GAKVV+E
Sbjct: 179 AKDLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216


>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449454778|ref|XP_004145131.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449472282|ref|XP_004153546.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449503355|ref|XP_004161961.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 214

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = -3

Query: 300 AKDLVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 187
           AKDLV+K P+V KKG+SKEEGEQI+EKMKALGAKV++E
Sbjct: 177 AKDLVDKAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214


>gb|AFK38264.1| unknown [Medicago truncatula]
          Length = 216

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = -3

Query: 300 AKDLVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 187
           AKD+VEK P++ KKGVSKEEGEQIIEKMKALGA VV+E
Sbjct: 179 AKDIVEKTPSIIKKGVSKEEGEQIIEKMKALGANVVLE 216


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