BLASTX nr result

ID: Cnidium21_contig00027813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027813
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601050.1| F-box/kelch-repeat protein [Medicago truncat...    61   1e-07
gb|AFK44336.1| unknown [Lotus japonicus]                               57   2e-06
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    57   2e-06
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    56   3e-06
ref|XP_003611186.1| F-box/kelch-repeat protein [Medicago truncat...    56   4e-06

>ref|XP_003601050.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355490098|gb|AES71301.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 415

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = +3

Query: 291 DELIKTEILSRLPVKSIVRCRCVCKSWKHLLSSDPGFVKSHLTRYSEN 434
           DELI  EILSRLPVK++++ +CVCKSWK L+S DP F K HL R   N
Sbjct: 21  DELI-VEILSRLPVKTLMQFKCVCKSWKTLISDDPVFAKFHLHRSPRN 67


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +3

Query: 291 DELIKTEILSRLPVKSIVRCRCVCKSWKHLLSSDPGFVKSHL 416
           DEL+  EILSRLPVKS+++ RCVCKSW  LL SDP F+K HL
Sbjct: 65  DELV-VEILSRLPVKSLLKFRCVCKSWM-LLISDPYFIKKHL 104


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = +3

Query: 300 IKTEILSRLPVKSIVRCRCVCKSWKHLLSSDPGFVKSHLTRYSENLN 440
           +  EILSRLPV+S+++ +CVCKSW  ++ SDP F+K HL R + N N
Sbjct: 98  VMAEILSRLPVRSLMQIKCVCKSWNTII-SDPKFIKMHLNRSARNPN 143


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +3

Query: 309 EILSRLPVKSIVRCRCVCKSWKHLLSSDPGFVKSHLTRYSENLN 440
           +ILSRLPVK +++ +CVC++W++L+SSDP F K HL R  +  N
Sbjct: 15  DILSRLPVKHLIQFKCVCRTWQYLISSDPEFAKLHLERVLQVTN 58


>ref|XP_003611186.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355512521|gb|AES94144.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +3

Query: 300 IKTEILSRLPVKSIVRCRCVCKSWKHLLSSDPGFVKSHL 416
           +  EI+SRLPVK ++R RCVC SW  L+S+DP F K HL
Sbjct: 21  LAAEIISRLPVKCVLRFRCVCNSWNSLISTDPKFAKKHL 59


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