BLASTX nr result

ID: Cnidium21_contig00027807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027807
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890162.1| hypothetical protein ARALYDRAFT_471835 [Arab...   201   9e-50
ref|NP_173089.1| organic cation/carnitine transporter 3 [Arabido...   198   6e-49
ref|XP_002265245.2| PREDICTED: solute carrier family 22 member 3...   191   5e-47
ref|XP_002266025.1| PREDICTED: solute carrier family 22 member 3...   190   2e-46
ref|XP_003523034.1| PREDICTED: LOW QUALITY PROTEIN: solute carri...   189   2e-46

>ref|XP_002890162.1| hypothetical protein ARALYDRAFT_471835 [Arabidopsis lyrata subsp.
           lyrata] gi|297336004|gb|EFH66421.1| hypothetical protein
           ARALYDRAFT_471835 [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score =  201 bits (510), Expect = 9e-50
 Identities = 91/173 (52%), Positives = 123/173 (71%), Gaps = 8/173 (4%)
 Frame = -3

Query: 497 NTSSPLVTGSDSGEHQ----SCLEDTIEKCIGDFGWSQLFQVVIVSLVWIFDSQQAFISI 330
           +++ PL++ S+S E        L++TIE+CIG+FGW+Q  Q  +VS  W+FD+QQ FI++
Sbjct: 3   DSTRPLLSDSNSSESNLPPPKSLDETIEQCIGNFGWAQFLQAALVSFAWVFDAQQTFITV 62

Query: 329 FTDAQPSWHCVPPLDV----NASNSNICLLPKNSWSWDLPPHTSIVSEWSLECAGSLISS 162
           FTD+QP+WHC     V    N S+SN+C LP  +WSWD  PH SI+SEW L+CAGS +  
Sbjct: 63  FTDSQPTWHCTDSDLVDSVCNTSSSNLCTLPNQTWSWDFNPHVSIISEWGLQCAGSFLKG 122

Query: 161 MPASSFYLGSFAGGFILVGLADSSFGRKNTMLLSCLVMSLAGILATVSTNIWV 3
           +PASSF+LG   GG +L  LADSS GRKN +LLSCL+MSL+ +L   ST+IWV
Sbjct: 123 LPASSFFLGCLIGGLVLSTLADSSLGRKNMLLLSCLIMSLSSMLTAFSTSIWV 175


>ref|NP_173089.1| organic cation/carnitine transporter 3 [Arabidopsis thaliana]
           gi|75265504|sp|Q9SA38.1|OCT3_ARATH RecName: Full=Organic
           cation/carnitine transporter 3; Short=AtOCT3
           gi|4966360|gb|AAD34691.1|AC006341_19 Is a member of the
           PF|00083 sugar transporter family [Arabidopsis thaliana]
           gi|18958009|gb|AAL79578.1| At1g16390/F3O9_19
           [Arabidopsis thaliana] gi|23507793|gb|AAN38700.1|
           At1g16390/F3O9_19 [Arabidopsis thaliana]
           gi|332191324|gb|AEE29445.1| organic cation/carnitine
           transporter 3 [Arabidopsis thaliana]
          Length = 518

 Score =  198 bits (503), Expect = 6e-49
 Identities = 93/173 (53%), Positives = 119/173 (68%), Gaps = 8/173 (4%)
 Frame = -3

Query: 497 NTSSPLVTGSDSGEHQ----SCLEDTIEKCIGDFGWSQLFQVVIVSLVWIFDSQQAFISI 330
           +++ PL++  +S E        LE+TIE+CIGDFGW+Q  Q  +VS  W FD+QQ FI++
Sbjct: 3   DSTRPLLSDFNSSESNLPPPRSLEETIERCIGDFGWAQFLQAALVSFAWFFDAQQTFITV 62

Query: 329 FTDAQPSWHCVPPLDV----NASNSNICLLPKNSWSWDLPPHTSIVSEWSLECAGSLISS 162
           FTD+QP WHC     V    N S+SN+C LP  +WSWDL PH SI+SEW L+CAGS +  
Sbjct: 63  FTDSQPMWHCDNSDRVDSVCNTSSSNLCTLPNQTWSWDLNPHVSIISEWGLQCAGSFLKG 122

Query: 161 MPASSFYLGSFAGGFILVGLADSSFGRKNTMLLSCLVMSLAGILATVSTNIWV 3
            PASSF+LG   GG  L  LADSS GRKN +LLSCL+MSL+ +L   ST+IWV
Sbjct: 123 FPASSFFLGCLIGGLALSTLADSSLGRKNMLLLSCLIMSLSSMLTAFSTSIWV 175


>ref|XP_002265245.2| PREDICTED: solute carrier family 22 member 3-like [Vitis vinifera]
          Length = 527

 Score =  191 bits (486), Expect = 5e-47
 Identities = 87/153 (56%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
 Frame = -3

Query: 458 EHQSCLEDTIEKCIGDFGWSQLFQVVIVSLVWIFDSQQAFISIFTDAQPSWHCVP-PLDV 282
           +H   L++T E+ IGDFGW+QL Q  +VS  W+FD+QQ FIS+FTDA+P WHC     ++
Sbjct: 23  KHLPSLDETFERYIGDFGWAQLLQAFLVSFAWVFDAQQTFISVFTDAEPPWHCTELGTEL 82

Query: 281 NASNSNICLLPKNSWSWDLPPHTSIVSEWSLECAGSLISSMPASSFYLGSFAGGFILVGL 102
             S SNIC LPK SW+WD    TSIVSEW+L CAGS+I S+PASSF+ G   GG +L  L
Sbjct: 83  CTSVSNICQLPKGSWAWDRAADTSIVSEWTLVCAGSIIKSLPASSFFTGCMVGGLVLATL 142

Query: 101 ADSSFGRKNTMLLSCLVMSLAGILATVSTNIWV 3
           ADSSFGRKN +  SCL+MS  GIL   S N+W+
Sbjct: 143 ADSSFGRKNMLFFSCLLMSATGILTIFSPNVWI 175


>ref|XP_002266025.1| PREDICTED: solute carrier family 22 member 3-like [Vitis vinifera]
          Length = 520

 Score =  190 bits (482), Expect = 2e-46
 Identities = 86/153 (56%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
 Frame = -3

Query: 458 EHQSCLEDTIEKCIGDFGWSQLFQVVIVSLVWIFDSQQAFISIFTDAQPSWHCVP-PLDV 282
           +H   L++T E+ IGDFGW+QL Q  +VS  W+FD+QQ FIS+FTDA+P WHC     ++
Sbjct: 23  KHLPSLDETFERYIGDFGWAQLLQAFLVSFAWVFDAQQTFISLFTDAEPPWHCTELGTEL 82

Query: 281 NASNSNICLLPKNSWSWDLPPHTSIVSEWSLECAGSLISSMPASSFYLGSFAGGFILVGL 102
             S SNIC LPK SW+WD    TSIVSEW+L CAGS+I S+PASSF++G   GG +L  L
Sbjct: 83  CTSVSNICQLPKGSWAWDRAADTSIVSEWTLVCAGSIIKSLPASSFFMGCMVGGLVLATL 142

Query: 101 ADSSFGRKNTMLLSCLVMSLAGILATVSTNIWV 3
           ADSS GRKN +  SCL+MS  GIL   S N+W+
Sbjct: 143 ADSSLGRKNMLFFSCLLMSATGILTIFSPNVWI 175


>ref|XP_003523034.1| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 22 member
           8-like [Glycine max]
          Length = 528

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/178 (49%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
 Frame = -3

Query: 530 T*IQNQVMDDNNTSSPLVTGSDSGEHQSCLEDTIEKCIGDFGWSQLFQVVIVSLVWIFDS 351
           T + +Q    +++S        S +H   L  T+E CIG+F WSQ  Q ++VSL WIFD+
Sbjct: 5   TPLLSQPNPSSSSSPDTQEAPPSNQHHPSLGSTVELCIGEFNWSQFLQSILVSLAWIFDA 64

Query: 350 QQAFISIFTDAQPSWHCVPPLDVNASNS--NICLLPKNSWSWDLPPHTSIVSEWSLECAG 177
           QQ FIS+FTDA P WHC      NA  +   +C LPK SW+WD+P   SIVSEW LECA 
Sbjct: 65  QQTFISVFTDALPEWHCTER-GANACKTATTVCSLPKGSWAWDVPTQASIVSEWGLECAN 123

Query: 176 SLISSMPASSFYLGSFAGGFILVGLADSSFGRKNTMLLSCLVMSLAGILATVSTNIWV 3
           S I+ +PAS F+LG   GGF+L  LADSS GRKN +  SCLVM++  +L T+S N+W+
Sbjct: 124 SAITGLPASMFFLGCLIGGFVLASLADSSLGRKNMLFFSCLVMAITSLLVTLSPNVWI 181


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