BLASTX nr result

ID: Cnidium21_contig00027790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027790
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    79   5e-13
ref|XP_003535727.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    73   2e-11
ref|XP_003555902.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    70   1e-10
ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
gb|ABK95116.1| unknown [Populus trichocarpa]                           70   1e-10

>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/120 (40%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
 Frame = +2

Query: 11  GNGGTCVEKE-KVAI-----KNDCDLVGKKKKIFLALDYEGVISAWADKKRPWVTGDGRP 172
           G+  TC E+E KVA+      N  D   KK KI L LDYE +I+AWA +  PW  G  RP
Sbjct: 277 GSPATCEEEEEKVAVGAMDMNNKVDDPKKKNKILLRLDYEAIITAWASQGSPWTNGH-RP 335

Query: 173 ELDLNDCWSDCMDACGRVDYQVCG-------SSNMMADEGRQAXXXXXXXXXXXXLFSKK 331
           ELD +DCW DC+  CG   +   G           M D GR+A            LFSKK
Sbjct: 336 ELDPDDCWPDCLGTCGIQVHHPYGEFGGMGEQQAAMGDGGREARVSRYREKRRTRLFSKK 395


>ref|XP_003535727.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Glycine max]
          Length = 419

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
 Frame = +2

Query: 41  KVAIKNDCDLVGKKKKIFLALDYEGVISAWADKKRPWVTGDGRPELDLNDCWSDCMDACG 220
           ++  K + D   KK KI L LDYE VI AWA +K PW T D +P LD ++CW  CM +C 
Sbjct: 282 ELGAKKENDDEVKKNKISLQLDYEAVIIAWASQKSPWTTAD-KPNLDPDECWKQCMGSCE 340

Query: 221 RVDYQVCGSSN------MMADEGRQAXXXXXXXXXXXXLFSKK 331
              +  CG         ++ D GR+A            LFSKK
Sbjct: 341 TAYHHPCGEMGGFGIHPVIIDGGREARVSRYREKRRTRLFSKK 383


>ref|XP_003555902.1| PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Glycine max]
          Length = 418

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
 Frame = +2

Query: 53  KNDCDLVGKKKKIFLALDYEGVISAWADKKRPWVTGDGRPELDLNDCWSDCMDACGRVDY 232
           +ND D V K+KK+ L LDYE +I AWA +K PW T D +  LD ++CW  CM +CG   +
Sbjct: 286 ENDDDEV-KRKKVSLQLDYEAIIIAWASQKSPWTTAD-KQNLDPDECWHQCMGSCGTAFH 343

Query: 233 QVCGS------SNMMADEGRQAXXXXXXXXXXXXLFSKK 331
              G        +++ D GR+A            LFSKK
Sbjct: 344 HPYGELGGFGIHSVIVDGGREARVSRYREKRRTRLFSKK 382


>ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|222851278|gb|EEE88825.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
 Frame = +2

Query: 74  GKKKKIFLALDYEGVISAWADKKRPWVTGDGRPELDLNDCWSDCMDACGRVDYQV----- 238
           G K+KI L+LDYE V++AWA +  PW  G+ RP+ D ++CW DCM  CG   +       
Sbjct: 291 GAKRKILLSLDYEAVMTAWASQGSPWTNGN-RPDFDPDECWPDCMGICGAQLHHPYGDMI 349

Query: 239 --CGSSNMMADEGRQAXXXXXXXXXXXXLFSKK 331
              G+   M D GR+A            LFSKK
Sbjct: 350 SGLGAHPAMVDGGREARVSRYREKRRTRLFSKK 382


>gb|ABK95116.1| unknown [Populus trichocarpa]
          Length = 444

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
 Frame = +2

Query: 74  GKKKKIFLALDYEGVISAWADKKRPWVTGDGRPELDLNDCWSDCMDACGRVDYQV----- 238
           G K+KI L+LDYE V++AWA +  PW  G+ RP+ D ++CW DCM  CG   +       
Sbjct: 324 GAKRKILLSLDYEAVMTAWASQGSPWTNGN-RPDFDPDECWPDCMGICGAQLHHPYGDMI 382

Query: 239 --CGSSNMMADEGRQAXXXXXXXXXXXXLFSKK 331
              G+   M D GR+A            LFSKK
Sbjct: 383 SGLGAHPAMVDGGREARVSRYREKRRTRLFSKK 415


Top