BLASTX nr result

ID: Cnidium21_contig00027759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027759
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]             181   4e-44
emb|CBI40069.3| unnamed protein product [Vitis vinifera]              171   4e-41
ref|XP_002270592.1| PREDICTED: 4-coumarate--CoA ligase-like 9 [V...   171   4e-41
ref|XP_002334423.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]...   169   2e-40

>gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]
          Length = 540

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/102 (81%), Positives = 93/102 (91%)
 Frame = -3

Query: 308 SVGKLTGHCEARIVDPESGNALPPGKLGELWIRGPLVMKGYIGNAQATSETLVGDGWLRT 129
           SVG+L  +CEARIVDP++G ALPPGK GELW++GP+ MKGY+G+ +ATSETLV DGWLRT
Sbjct: 354 SVGRLQANCEARIVDPDTGTALPPGKQGELWLKGPITMKGYVGDPKATSETLVLDGWLRT 413

Query: 128 GDLCYIDNEGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHP 3
           GDLCY D EGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHP
Sbjct: 414 GDLCYFDEEGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHP 455


>emb|CBI40069.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/102 (79%), Positives = 90/102 (88%)
 Frame = -3

Query: 308 SVGKLTGHCEARIVDPESGNALPPGKLGELWIRGPLVMKGYIGNAQATSETLVGDGWLRT 129
           SVG+LTG  EA+IVDP++G ALPP K GELW+RGP VMKGY+G+ +AT ETLV DGWLRT
Sbjct: 328 SVGRLTGIFEAKIVDPDTGLALPPCKQGELWVRGPAVMKGYVGDRKATRETLVSDGWLRT 387

Query: 128 GDLCYIDNEGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHP 3
           GDLCYID EGFL+VVDRLKELIKYKGYQV PAELE LLQSHP
Sbjct: 388 GDLCYIDGEGFLYVVDRLKELIKYKGYQVAPAELEHLLQSHP 429


>ref|XP_002270592.1| PREDICTED: 4-coumarate--CoA ligase-like 9 [Vitis vinifera]
          Length = 543

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/102 (79%), Positives = 90/102 (88%)
 Frame = -3

Query: 308 SVGKLTGHCEARIVDPESGNALPPGKLGELWIRGPLVMKGYIGNAQATSETLVGDGWLRT 129
           SVG+LTG  EA+IVDP++G ALPP K GELW+RGP VMKGY+G+ +AT ETLV DGWLRT
Sbjct: 358 SVGRLTGIFEAKIVDPDTGLALPPCKQGELWVRGPAVMKGYVGDRKATRETLVSDGWLRT 417

Query: 128 GDLCYIDNEGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHP 3
           GDLCYID EGFL+VVDRLKELIKYKGYQV PAELE LLQSHP
Sbjct: 418 GDLCYIDGEGFLYVVDRLKELIKYKGYQVAPAELEHLLQSHP 459


>ref|XP_002334423.1| predicted protein [Populus trichocarpa] gi|222870385|gb|EEF07516.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  170 bits (430), Expect = 1e-40
 Identities = 79/102 (77%), Positives = 89/102 (87%)
 Frame = -3

Query: 308 SVGKLTGHCEARIVDPESGNALPPGKLGELWIRGPLVMKGYIGNAQATSETLVGDGWLRT 129
           SVG+LT  CEA+IVD ++G+ALPPGK GELW+RG  +MKGY+G+ +ATS TL  DGWLRT
Sbjct: 2   SVGRLTAGCEAKIVDADTGDALPPGKQGELWVRGSTIMKGYVGDPEATSTTLDPDGWLRT 61

Query: 128 GDLCYIDNEGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHP 3
           GDLCYID EGFLFVVDRLKELIKYKGYQV PAELEQLL SHP
Sbjct: 62  GDLCYIDEEGFLFVVDRLKELIKYKGYQVAPAELEQLLHSHP 103


>ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224133074|ref|XP_002327955.1| acyl:coa ligase
           [Populus trichocarpa] gi|222837363|gb|EEE75742.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222837364|gb|EEE75743.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 548

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/102 (77%), Positives = 89/102 (87%)
 Frame = -3

Query: 308 SVGKLTGHCEARIVDPESGNALPPGKLGELWIRGPLVMKGYIGNAQATSETLVGDGWLRT 129
           SVG+LT  CEA+IVD ++G+ALPPGK GELW+RG  +MKGY+G+ +ATS TL  DGWLRT
Sbjct: 366 SVGRLTACCEAKIVDADTGDALPPGKQGELWVRGSTIMKGYVGDPEATSTTLDPDGWLRT 425

Query: 128 GDLCYIDNEGFLFVVDRLKELIKYKGYQVPPAELEQLLQSHP 3
           GDLCYID EGFLFVVDRLKELIKYKGYQV PAELEQLL SHP
Sbjct: 426 GDLCYIDEEGFLFVVDRLKELIKYKGYQVAPAELEQLLHSHP 467


Top