BLASTX nr result

ID: Cnidium21_contig00027731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027731
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530072.1| leucine-rich repeat-containing protein, puta...    90   2e-16
ref|XP_002329457.1| tir-nbs-lrr resistance protein [Populus tric...    90   2e-16
ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vi...    88   8e-16
ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...    87   2e-15
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]    86   2e-15

>ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223530425|gb|EEF32312.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 52/133 (39%), Positives = 74/133 (55%)
 Frame = +3

Query: 3   IMGNVATRASTTVSHLEKYLFGIDSAVEEIYQKLSMESNDVRAIGICGMGGIGKTTIAKA 182
           I+ NV+T+ + T+ H+ ++  G++S  +E+   L+  S DV  +GICG GGIGKTTIAKA
Sbjct: 168 IVENVSTKLNRTLLHVAEHPVGLESHAKEVMSLLNPSSKDVWMVGICGTGGIGKTTIAKA 227

Query: 183 FYNKYVNKFDISCFNENFEQYSQGVTSXXXXXXXXXXXXXRRKNYMVINVESKIRKLKQI 362
            YNK  N+F+ SCF EN  +  +                   KN  V N    I  +K  
Sbjct: 228 IYNKIANQFEGSCFLENVRKTPE--ECFVQLQESLLIEVLGDKNIFVGNFSRGINCIKDR 285

Query: 363 LHSKKALIVLDDL 401
           L SK+ LIV+DD+
Sbjct: 286 LCSKRVLIVIDDV 298


>ref|XP_002329457.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222870137|gb|EEF07268.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 373

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/133 (36%), Positives = 73/133 (54%)
 Frame = +3

Query: 3   IMGNVATRASTTVSHLEKYLFGIDSAVEEIYQKLSMESNDVRAIGICGMGGIGKTTIAKA 182
           I+G ++   S+T   +  Y  GI+S V+++   L+  SN+V  +GICGMGGIGKTTIAKA
Sbjct: 181 IVGEISRELSSTYLFIAFYPVGINSRVQQLNFLLNAGSNEVCIVGICGMGGIGKTTIAKA 240

Query: 183 FYNKYVNKFDISCFNENFEQYSQGVTSXXXXXXXXXXXXXRRKNYMVINVESKIRKLKQI 362
            Y +  + FD  CF  N  + SQ                 +     + NV+  +  +K+ 
Sbjct: 241 MYYELFHSFDGKCFLANVREISQQPNGHVKLQEQLLFDILKTDKIKIGNVDRGMNMIKER 300

Query: 363 LHSKKALIVLDDL 401
           LHS+K L++LDD+
Sbjct: 301 LHSRKVLLILDDV 313


>ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 852

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/124 (37%), Positives = 70/124 (56%)
 Frame = +3

Query: 30  STTVSHLEKYLFGIDSAVEEIYQKLSMESNDVRAIGICGMGGIGKTTIAKAFYNKYVNKF 209
           S  + H+ K + G++  +E++   + +ESNDVR IGI G+GGIGKTTIAK  YN   ++F
Sbjct: 193 SKLLLHVSKNIVGMNFHLEKLKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQF 252

Query: 210 DISCFNENFEQYSQGVTSXXXXXXXXXXXXXRRKNYMVINVESKIRKLKQILHSKKALIV 389
           +   F EN  + S+  +S             + KN  + NV   I  ++   HSKK L++
Sbjct: 253 ESRIFLENVRERSKDYSSLLQLQKELLNGVMKGKNKKISNVHEGINVIRNRFHSKKVLLI 312

Query: 390 LDDL 401
           LDD+
Sbjct: 313 LDDV 316


>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/133 (35%), Positives = 76/133 (57%)
 Frame = +3

Query: 3   IMGNVATRASTTVSHLEKYLFGIDSAVEEIYQKLSMESNDVRAIGICGMGGIGKTTIAKA 182
           I+  + ++ S  + +++K+L G+ S ++EI  ++S+ESNDVR +GICG+GG+GKTTIAK 
Sbjct: 172 IIEEILSKLSRKLLYVDKHLVGVSSRLKEILLRVSIESNDVRMVGICGIGGVGKTTIAKV 231

Query: 183 FYNKYVNKFDISCFNENFEQYSQGVTSXXXXXXXXXXXXXRRKNYMVINVESKIRKLKQI 362
            YN   ++F+   F  N  + S+                    +  + N++  I  L   
Sbjct: 232 VYNLISSQFEGISFLANIREVSKN-CGLLPLQKQLLGDILMGWSQRISNLDEGINVLMDR 290

Query: 363 LHSKKALIVLDDL 401
           LHSKK LI+LDD+
Sbjct: 291 LHSKKVLIILDDV 303


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/133 (35%), Positives = 76/133 (57%)
 Frame = +3

Query: 3   IMGNVATRASTTVSHLEKYLFGIDSAVEEIYQKLSMESNDVRAIGICGMGGIGKTTIAKA 182
           I+  + ++ S  + +++K+L G+ S ++EI  ++S+ESNDVR +GICG+GG+GKTTIAK 
Sbjct: 172 IIEEILSKLSRKLLYVDKHLVGVSSRLKEILLRVSIESNDVRMVGICGIGGVGKTTIAKV 231

Query: 183 FYNKYVNKFDISCFNENFEQYSQGVTSXXXXXXXXXXXXXRRKNYMVINVESKIRKLKQI 362
            YN   ++F+   F  N  + S+                    +  + N++  I  L   
Sbjct: 232 VYNLISSQFEGISFLANIREVSKN-CGLLPLQKQLLGDILMGWSQRISNLBEGINVLMDR 290

Query: 363 LHSKKALIVLDDL 401
           LHSKK LI+LDD+
Sbjct: 291 LHSKKVLIILDDV 303


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