BLASTX nr result

ID: Cnidium21_contig00027715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027715
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235041.1| uncharacterized protein LOC100305670 [Glycin...    84   2e-14
ref|XP_002526766.1| Thylakoid lumenal 19 kDa protein, chloroplas...    84   2e-14
ref|XP_003546881.1| PREDICTED: thylakoid lumenal 19 kDa protein,...    83   2e-14
ref|XP_004158197.1| PREDICTED: thylakoid lumenal 19 kDa protein,...    80   1e-13
ref|XP_004135924.1| PREDICTED: thylakoid lumenal 19 kDa protein,...    80   1e-13

>ref|NP_001235041.1| uncharacterized protein LOC100305670 [Glycine max]
           gi|255626267|gb|ACU13478.1| unknown [Glycine max]
          Length = 246

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -3

Query: 272 ISVTCARNKLYAHFVNAPTPEWNKDKETLRHVHESFKTIG 153
           ISVTCA+NKLYAHFVNAPTPEWN+DK+ LRHVHESFKT+G
Sbjct: 205 ISVTCAKNKLYAHFVNAPTPEWNRDKDVLRHVHESFKTVG 244


>ref|XP_002526766.1| Thylakoid lumenal 19 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223533893|gb|EEF35620.1| Thylakoid
           lumenal 19 kDa protein, chloroplast precursor, putative
           [Ricinus communis]
          Length = 240

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -3

Query: 272 ISVTCARNKLYAHFVNAPTPEWNKDKETLRHVHESFKTIG 153
           I VTCA+NKLYAHFVNAPTPEWNKD+ETLRH+HESFKT+G
Sbjct: 199 IKVTCAKNKLYAHFVNAPTPEWNKDEETLRHLHESFKTVG 238


>ref|XP_003546881.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 240

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -3

Query: 272 ISVTCARNKLYAHFVNAPTPEWNKDKETLRHVHESFKTIG 153
           ISVTCA+NKLYAHFVNAPTPEWN+DK+ LRHVHESFKT+G
Sbjct: 199 ISVTCAKNKLYAHFVNAPTPEWNRDKDMLRHVHESFKTVG 238


>ref|XP_004158197.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
           [Cucumis sativus]
          Length = 250

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = -3

Query: 272 ISVTCARNKLYAHFVNAPTPEWNKDKETLRHVHESFKTIG 153
           ISVTCA+NKLYAHFVNAPTPEWN+D++ LRHVH+SFKT+G
Sbjct: 209 ISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTVG 248


>ref|XP_004135924.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
           [Cucumis sativus]
          Length = 245

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = -3

Query: 272 ISVTCARNKLYAHFVNAPTPEWNKDKETLRHVHESFKTIG 153
           ISVTCA+NKLYAHFVNAPTPEWN+D++ LRHVH+SFKT+G
Sbjct: 204 ISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTVG 243


Top