BLASTX nr result
ID: Cnidium21_contig00027700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00027700
(977 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] 149 1e-33
emb|CBI19489.3| unnamed protein product [Vitis vinifera] 147 5e-33
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [... 147 5e-33
gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana taba... 146 8e-33
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha... 145 1e-32
>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 149 bits (376), Expect = 1e-33
Identities = 108/295 (36%), Positives = 157/295 (53%), Gaps = 16/295 (5%)
Frame = -3
Query: 900 TLYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEA 721
+LYVG+LD SVT+ QL++ F+ +V C D T +SLGYG+V + N A A
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVC---RDLSTGRSLGYGYVNYSNQQDATRA 97
Query: 720 MKLLDSTMLMNKPIQVILS---PFHHAFSPSVIFIKNLHKSVDKNALFHVLKRYGNIISI 550
+ +L+ T L NK I+V +S P IFIKNL KS+D AL +G IIS
Sbjct: 98 IDVLNFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISC 157
Query: 549 NLATDAS----GYAAVRFDCVEAAQTAITDLNGRLFWNYKRLHVSSFLMISEYG--FPEL 388
+ATDAS GY V++D EAAQTAI LNG L N K+++V FL + +
Sbjct: 158 KIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLM-NDKQVYVGVFLRKQDRDSEMSKT 216
Query: 387 AYNKIFIKILSDKITKQYLRDTFSPFGHVTTVSI-AEKFPKGQLYGRVAFENSKVADKAA 211
+N I++K LSD ++ LR TF +G +T+V + + K + +G V FEN + A KA
Sbjct: 217 KFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAV 276
Query: 210 KAI---KHHPLLTYLGRLHEKSS---TFRALGEMDAKMIVTRQLHLNLFLAQEED 64
A+ K Y+G+ +KS ++ E K V + +NL++ +D
Sbjct: 277 DALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLDD 331
Score = 92.4 bits (228), Expect = 1e-16
Identities = 92/326 (28%), Positives = 147/326 (45%), Gaps = 27/326 (8%)
Frame = -3
Query: 897 LYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEAM 718
+++ NLD S+ K L E F + C I D+ + QS GYGFV++ + + A A+
Sbjct: 130 IFIKNLDKSIDIKALHETFSSFG---TIISCKIATDA-SGQSKGYGFVQYDSEEAAQTAI 185
Query: 717 KLLDSTMLMNKPIQVILSPFHHAFSPSV-------IFIKNLHKSVDKNALFHVLKRYGNI 559
L+ ++ +K + V + + I++KNL S ++ L YG I
Sbjct: 186 DKLNGMLMNDKQVYVGVFLRKQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTI 245
Query: 558 ISINLATDASG----YAAVRFDCVEAAQTAITDLNGRLFWNYKRLHVSSFLMISEYG--- 400
S+ + DA G + V F+ E A A+ LNG+ F + K +V SE
Sbjct: 246 TSVVVMRDADGKSKCFGFVNFENPEDAAKAVDALNGKKF-DDKEWYVGKAQKKSEREVEL 304
Query: 399 ---FPELAYNKI--------FIKILSDKITKQYLRDTFSPFGHVTTVSIAEKFPKGQLYG 253
F + ++ ++K L D I + L++ FS +G +T+ + P G G
Sbjct: 305 KSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRD-PSGISRG 363
Query: 252 R--VAFENSKVADKAAKAIKHHPLLTYLGRLHEKSSTFRALGEMDAKMIVTRQLHLNLFL 79
VAF + A RALGEM+ KMIV++ L+ + L
Sbjct: 364 SGFVAFSTPEEAS-------------------------RALGEMNGKMIVSKPLY--VAL 396
Query: 78 AQEEDEQQKTERSQAQAQFSQMRPIA 1
AQ ++E+ R++ QAQFSQMRP+A
Sbjct: 397 AQRKEER----RARLQAQFSQMRPVA 418
>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 147 bits (370), Expect = 5e-33
Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 16/300 (5%)
Frame = -3
Query: 915 MAPRVTLYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYD 736
+A +LYVG+LD ++T+ QL++ F +V C D T +SLGYG+V + N
Sbjct: 14 VANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVC---RDLSTRRSLGYGYVNYSNPQ 70
Query: 735 QAAEAMKLLDSTMLMNKPIQVILS---PFHHAFSPSVIFIKNLHKSVDKNALFHVLKRYG 565
AA A+ LL+ T L KPI+++ S P + IFIKNL KS+D AL +G
Sbjct: 71 DAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFG 130
Query: 564 NIISINLATDAS----GYAAVRFDCVEAAQTAITDLNGRLFWNYKRLHVSSFL--MISEY 403
NI+S +ATD S GY V+FD E+AQ AI LNG L N K+++V FL E
Sbjct: 131 NILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLI-NDKQVYVGQFLRKQERET 189
Query: 402 GFPELAYNKIFIKILSDKITKQYLRDTFSPFGHVTTVSI-AEKFPKGQLYGRVAFENSKV 226
+ +N +++K LS+ T++ L++ F FG +T+V + + K + +G V FEN+
Sbjct: 190 ALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENADD 249
Query: 225 ADKAAKAI---KHHPLLTYLGRL---HEKSSTFRALGEMDAKMIVTRQLHLNLFLAQEED 64
A +A +A+ K Y+G+ +E+ + E K +V + +NL++ +D
Sbjct: 250 AAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDD 309
Score = 94.7 bits (234), Expect = 3e-17
Identities = 91/327 (27%), Positives = 146/327 (44%), Gaps = 28/327 (8%)
Frame = -3
Query: 897 LYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEAM 718
+++ NLD S+ NK L + F N+ C I D + QS GYGFV+F N + A A+
Sbjct: 108 IFIKNLDKSIDNKALHDTFSAFG---NILSCKIATDP-SGQSKGYGFVQFDNEESAQNAI 163
Query: 717 KLLDSTMLMNKPIQVILSPFHHAFSPSV---------IFIKNLHKSVDKNALFHVLKRYG 565
L+ ++ +K QV + F +++KNL +S + L ++ +G
Sbjct: 164 DKLNGMLINDK--QVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFG 221
Query: 564 NIISINLATDASG----YAAVRFDCVEAAQTAITDLNGRLF----WNYKRLHVSSFLMIS 409
I S+ + D G + V F+ + A A+ LNG+ F W + +
Sbjct: 222 IITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELE 281
Query: 408 EYGFPELAYNKI---------FIKILSDKITKQYLRDTFSPFGHVTTVSIAEKFPKGQLY 256
G E + ++ +IK L D I L++ FS FG +T+ + P G
Sbjct: 282 LKGRFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRD-PSGISR 340
Query: 255 GR--VAFENSKVADKAAKAIKHHPLLTYLGRLHEKSSTFRALGEMDAKMIVTRQLHLNLF 82
G VAF S+ A RAL EM+ KM+V++ L++ L
Sbjct: 341 GSGFVAFSTSEEAS-------------------------RALTEMNGKMVVSKPLYVAL- 374
Query: 81 LAQEEDEQQKTERSQAQAQFSQMRPIA 1
AQ ++E+ R++ QAQFSQMRP++
Sbjct: 375 -AQRKEER----RARLQAQFSQMRPVS 396
>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein
VITISV_017035 [Vitis vinifera]
Length = 640
Score = 147 bits (370), Expect = 5e-33
Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 16/300 (5%)
Frame = -3
Query: 915 MAPRVTLYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYD 736
+A +LYVG+LD ++T+ QL++ F +V C D T +SLGYG+V + N
Sbjct: 14 VANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVC---RDLSTRRSLGYGYVNYSNPQ 70
Query: 735 QAAEAMKLLDSTMLMNKPIQVILS---PFHHAFSPSVIFIKNLHKSVDKNALFHVLKRYG 565
AA A+ LL+ T L KPI+++ S P + IFIKNL KS+D AL +G
Sbjct: 71 DAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFG 130
Query: 564 NIISINLATDAS----GYAAVRFDCVEAAQTAITDLNGRLFWNYKRLHVSSFL--MISEY 403
NI+S +ATD S GY V+FD E+AQ AI LNG L N K+++V FL E
Sbjct: 131 NILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLI-NDKQVYVGQFLRKQERET 189
Query: 402 GFPELAYNKIFIKILSDKITKQYLRDTFSPFGHVTTVSI-AEKFPKGQLYGRVAFENSKV 226
+ +N +++K LS+ T++ L++ F FG +T+V + + K + +G V FEN+
Sbjct: 190 ALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENADD 249
Query: 225 ADKAAKAI---KHHPLLTYLGRL---HEKSSTFRALGEMDAKMIVTRQLHLNLFLAQEED 64
A +A +A+ K Y+G+ +E+ + E K +V + +NL++ +D
Sbjct: 250 AAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDD 309
Score = 94.7 bits (234), Expect = 3e-17
Identities = 91/327 (27%), Positives = 146/327 (44%), Gaps = 28/327 (8%)
Frame = -3
Query: 897 LYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEAM 718
+++ NLD S+ NK L + F N+ C I D + QS GYGFV+F N + A A+
Sbjct: 108 IFIKNLDKSIDNKALHDTFSAFG---NILSCKIATDP-SGQSKGYGFVQFDNEESAQNAI 163
Query: 717 KLLDSTMLMNKPIQVILSPFHHAFSPSV---------IFIKNLHKSVDKNALFHVLKRYG 565
L+ ++ +K QV + F +++KNL +S + L ++ +G
Sbjct: 164 DKLNGMLINDK--QVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFG 221
Query: 564 NIISINLATDASG----YAAVRFDCVEAAQTAITDLNGRLF----WNYKRLHVSSFLMIS 409
I S+ + D G + V F+ + A A+ LNG+ F W + +
Sbjct: 222 IITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELE 281
Query: 408 EYGFPELAYNKI---------FIKILSDKITKQYLRDTFSPFGHVTTVSIAEKFPKGQLY 256
G E + ++ +IK L D I L++ FS FG +T+ + P G
Sbjct: 282 LKGRFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRD-PSGISR 340
Query: 255 GR--VAFENSKVADKAAKAIKHHPLLTYLGRLHEKSSTFRALGEMDAKMIVTRQLHLNLF 82
G VAF S+ A RAL EM+ KM+V++ L++ L
Sbjct: 341 GSGFVAFSTSEEAS-------------------------RALTEMNGKMVVSKPLYVAL- 374
Query: 81 LAQEEDEQQKTERSQAQAQFSQMRPIA 1
AQ ++E+ R++ QAQFSQMRP++
Sbjct: 375 -AQRKEER----RARLQAQFSQMRPVS 396
>gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 146 bits (368), Expect = 8e-33
Identities = 102/295 (34%), Positives = 161/295 (54%), Gaps = 16/295 (5%)
Frame = -3
Query: 900 TLYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEA 721
+LYVG+LD +VT+ QL++ F+ +V C D + +SLGYG+V + N AA A
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVC---RDLTSQRSLGYGYVNYGNPQDAARA 84
Query: 720 MKLLDSTMLMNKPIQVILS---PFHHAFSPSVIFIKNLHKSVDKNALFHVLKRYGNIISI 550
+++L+ T L KPI+++ S P IFIKNL K++D AL +GNI+S
Sbjct: 85 LEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSC 144
Query: 549 NLATDAS----GYAAVRFDCVEAAQTAITDLNGRLFWNYKRLHVSSFLMISE--YGFPEL 388
+A D+S GY V++D EAAQ AI LNG L N K+++V F+ E +
Sbjct: 145 KVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLL-NDKQVYVGPFVRKHERDMAVDKT 203
Query: 387 AYNKIFIKILSDKITKQYLRDTFSPFGHVTTVSI-AEKFPKGQLYGRVAFENSKVADKAA 211
+ +F+K LS+ ++ LR F FG +T+V++ ++ K + +G V FEN++ A +A
Sbjct: 204 RFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDAARAV 263
Query: 210 KAIKHHPLLT---YLGRLHEKSSTFRALG---EMDAKMIVTRQLHLNLFLAQEED 64
+A+ + L ++GR +KS L E AK V + LNL++ +D
Sbjct: 264 EALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNLDD 318
Score = 103 bits (257), Expect = 6e-20
Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 28/327 (8%)
Frame = -3
Query: 897 LYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEAM 718
+++ NLD ++ +K L + F N+ C + +DS + QS GYGFV++ + + A +A+
Sbjct: 117 IFIKNLDKAIDHKALHDTFSAFG---NILSCKVAVDS-SGQSKGYGFVQYDSEEAAQKAI 172
Query: 717 KLLDSTMLMNKPIQVILSPF--HHAFSPSV-------IFIKNLHKSVDKNALFHVLKRYG 565
+ L+ +L +K QV + PF H +V +F+KNL +S + L + +G
Sbjct: 173 EKLNGMLLNDK--QVYVGPFVRKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFG 230
Query: 564 NIISINLATDASG----YAAVRFDCVEAAQTAITDLNGRLF----WNYKRLHVSSFL-MI 412
I S+ + D G + V F+ E A A+ LNG W R S M
Sbjct: 231 AITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREME 290
Query: 411 SEYGFPELAYNKI--------FIKILSDKITKQYLRDTFSPFGHVTTVSIAEKFPKGQLY 256
++ F + A + +IK L D I+ + L++ FSP+G +T+ + P G
Sbjct: 291 LKHRFEQSAKEAVDKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRD-PSGVSK 349
Query: 255 GR--VAFENSKVADKAAKAIKHHPLLTYLGRLHEKSSTFRALGEMDAKMIVTRQLHLNLF 82
G VAF N + A RAL EM+ KM+V++ L++ L
Sbjct: 350 GSGFVAFSNPEEAS-------------------------RALSEMNGKMVVSKPLYVAL- 383
Query: 81 LAQEEDEQQKTERSQAQAQFSQMRPIA 1
AQ ++E+ R++ QAQFSQMRPIA
Sbjct: 384 -AQRKEER----RARLQAQFSQMRPIA 405
>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 145 bits (366), Expect = 1e-32
Identities = 102/295 (34%), Positives = 161/295 (54%), Gaps = 16/295 (5%)
Frame = -3
Query: 900 TLYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEA 721
+LYVG+LD +VT+ QL++ F+ +V C D + +SLGYG+V + N AA A
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVC---RDLTSQRSLGYGYVNYGNPQDAARA 84
Query: 720 MKLLDSTMLMNKPIQVILS---PFHHAFSPSVIFIKNLHKSVDKNALFHVLKRYGNIISI 550
+++L+ T L KPI+++ S P IFIKNL K++D AL +GNI+S
Sbjct: 85 LEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSC 144
Query: 549 NLATDAS----GYAAVRFDCVEAAQTAITDLNGRLFWNYKRLHVSSFLMISE--YGFPEL 388
+A D+S GY V++D EAAQ AI LNG L N K+++V F+ E +
Sbjct: 145 KVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLL-NDKQVYVGPFVRKQERDMAVDKT 203
Query: 387 AYNKIFIKILSDKITKQYLRDTFSPFGHVTTVSI-AEKFPKGQLYGRVAFENSKVADKAA 211
+ +F+K LS+ ++ LR F FG +T+V++ ++ K + +G V FEN++ A +A
Sbjct: 204 RFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENAEDAARAV 263
Query: 210 KAIKHHPLLT---YLGRLHEKSSTFRALG---EMDAKMIVTRQLHLNLFLAQEED 64
+A+ + L ++GR +KS L E A+ V + LNL+L +D
Sbjct: 264 EALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNLDD 318
Score = 99.4 bits (246), Expect = 1e-18
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 28/327 (8%)
Frame = -3
Query: 897 LYVGNLDPSVTNKQLFEHFDDHAPDCNVDFCVIVMDSQTNQSLGYGFVEFHNYDQAAEAM 718
+++ NLD ++ +K L + F N+ C + +DS + QS GYGFV++ + + A +A+
Sbjct: 117 IFIKNLDKAIDHKALHDTFSAFG---NILSCKVAVDS-SGQSKGYGFVQYDSDEAAQKAI 172
Query: 717 KLLDSTMLMNKPIQVILSPFHHAFSPSV---------IFIKNLHKSVDKNALFHVLKRYG 565
+ L+ +L +K QV + PF + +F+KNL +S + L + +G
Sbjct: 173 EKLNGMLLNDK--QVYVGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFG 230
Query: 564 NIISINLATDASG----YAAVRFDCVEAAQTAITDLNGRLF----WNYKRLHVSSFL-MI 412
I S+ + D G + V F+ E A A+ LNG W R S M
Sbjct: 231 TITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREME 290
Query: 411 SEYGFPELAYNKI--------FIKILSDKITKQYLRDTFSPFGHVTTVSIAEKFPKGQLY 256
++ F + A + ++K L D I+ L++ FSP+G +T+ + P G
Sbjct: 291 LKHRFEQSAQEAVDKSQGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRD-PSGVSK 349
Query: 255 GR--VAFENSKVADKAAKAIKHHPLLTYLGRLHEKSSTFRALGEMDAKMIVTRQLHLNLF 82
G VAF + A RAL EM+ KM+V++ L++ L
Sbjct: 350 GSGFVAFSTPEEAS-------------------------RALSEMNGKMVVSKPLYVAL- 383
Query: 81 LAQEEDEQQKTERSQAQAQFSQMRPIA 1
AQ ++E+ R++ QAQFSQMRPIA
Sbjct: 384 -AQRKEER----RARLQAQFSQMRPIA 405