BLASTX nr result

ID: Cnidium21_contig00027697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027697
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   110   1e-22
ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric...   110   1e-22
ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   110   2e-22

>ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1|
           predicted protein [Populus trichocarpa]
          Length = 857

 Score =  112 bits (280), Expect = 4e-23
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -3

Query: 519 VFVYHKAFPMPALSFKFKNTDPLSGEDVDDSSQFISSVCWHGQSSTLVAANSMGNIKLLE 340
           VFVYHKAFPMP LSFKF NTDPLSG ++DD++QFISSVCW GQSSTLVAANS GNIK+LE
Sbjct: 796 VFVYHKAFPMPVLSFKFNNTDPLSGHEMDDAAQFISSVCWRGQSSTLVAANSTGNIKILE 855

Query: 339 MV 334
           MV
Sbjct: 856 MV 857


>ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1|
           predicted protein [Populus trichocarpa]
          Length = 851

 Score =  112 bits (280), Expect = 4e-23
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -3

Query: 519 VFVYHKAFPMPALSFKFKNTDPLSGEDVDDSSQFISSVCWHGQSSTLVAANSMGNIKLLE 340
           VFVYHKAFPMP LSFKF NTDPLSG ++DD++QFISSVCW GQSSTLVAANS GNIK+LE
Sbjct: 790 VFVYHKAFPMPVLSFKFNNTDPLSGHEMDDTAQFISSVCWRGQSSTLVAANSTGNIKILE 849

Query: 339 MV 334
           MV
Sbjct: 850 MV 851


>ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/63 (80%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
 Frame = -3

Query: 519  VFVYHKAFPMPALSFKFKNTDPLSGEDVDDSSQFISSVCWHGQ-SSTLVAANSMGNIKLL 343
            VF+YHKAFPMPALSFKF+NTDPLSG +VDD+ QF+SSVCWHGQ SSTL+AANS GN+K+L
Sbjct: 830  VFIYHKAFPMPALSFKFQNTDPLSGNEVDDAVQFVSSVCWHGQSSSTLLAANSTGNVKIL 889

Query: 342  EMV 334
            EMV
Sbjct: 890  EMV 892


>ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
            gi|223526576|gb|EEF28831.1| ubiquitin ligase protein
            cop1, putative [Ricinus communis]
          Length = 889

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = -3

Query: 519  VFVYHKAFPMPALSFKFKNTDPLSGEDVDDSSQFISSVCWHGQSSTLVAANSMGNIKLLE 340
            VF+YHKAFPMPALSFKF NTDPLSG ++DD +QFISSVCW  QSSTLVAANS GNIK+LE
Sbjct: 828  VFIYHKAFPMPALSFKFNNTDPLSGHEMDDPAQFISSVCWRSQSSTLVAANSTGNIKILE 887

Query: 339  MV 334
            MV
Sbjct: 888  MV 889


>ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/62 (79%), Positives = 58/62 (93%)
 Frame = -3

Query: 519  VFVYHKAFPMPALSFKFKNTDPLSGEDVDDSSQFISSVCWHGQSSTLVAANSMGNIKLLE 340
            VF+YHKAF MPALSFKF+NTDPLSG +VDD++QF+SSVCW GQSSTL+AANS GN+K+LE
Sbjct: 831  VFIYHKAFSMPALSFKFQNTDPLSGNEVDDAAQFVSSVCWRGQSSTLLAANSTGNVKILE 890

Query: 339  MV 334
            MV
Sbjct: 891  MV 892


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