BLASTX nr result

ID: Cnidium21_contig00027667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027667
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arab...    56   3e-06
ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana] ...    56   3e-06
gb|AAF02155.1|AC009853_15 unknown protein [Arabidopsis thaliana]       56   3e-06
ref|XP_002320566.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06
ref|XP_002303022.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arabidopsis lyrata subsp.
           lyrata] gi|297330492|gb|EFH60911.1| hypothetical protein
           ARALYDRAFT_478070 [Arabidopsis lyrata subsp. lyrata]
          Length = 189

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = +1

Query: 127 LITTACASVSGIILLTLSVVNIIQIRIGLYSCGSAESRRAIWALCSIVCIALIIYV 294
           ++ +A  SV G + L LS+VN+IQIR+GL SCGS  + +A+  L ++V  AL+IY+
Sbjct: 125 MMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYI 180


>ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana]
           gi|145331996|ref|NP_001078120.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|13877549|gb|AAK43852.1|AF370475_1 Unknown protein
           [Arabidopsis thaliana] gi|20148735|gb|AAM10258.1|
           unknown protein [Arabidopsis thaliana]
           gi|332641030|gb|AEE74551.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332641031|gb|AEE74552.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 189

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = +1

Query: 127 LITTACASVSGIILLTLSVVNIIQIRIGLYSCGSAESRRAIWALCSIVCIALIIYV 294
           ++ +A  SV G + L LS+VN+IQIR+GL SCGS  + +A+  L ++V  AL+IY+
Sbjct: 125 MMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYI 180


>gb|AAF02155.1|AC009853_15 unknown protein [Arabidopsis thaliana]
          Length = 180

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = +1

Query: 127 LITTACASVSGIILLTLSVVNIIQIRIGLYSCGSAESRRAIWALCSIVCIALIIYV 294
           ++ +A  SV G + L LS+VN+IQIR+GL SCGS  + +A+  L ++V  AL+IY+
Sbjct: 116 MMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYI 171


>ref|XP_002320566.1| predicted protein [Populus trichocarpa] gi|222861339|gb|EEE98881.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/61 (44%), Positives = 43/61 (70%)
 Frame = +1

Query: 112 LKDVMLITTACASVSGIILLTLSVVNIIQIRIGLYSCGSAESRRAIWALCSIVCIALIIY 291
           ++  ML+ +A  S+ G + LT+S+V++IQI++G  SCGS  + RA  +L +IV +AL IY
Sbjct: 108 IRGSMLLLSAWGSIFGCVFLTMSMVDVIQIKVGKLSCGSVYAFRAAGSLIAIVLLALGIY 167

Query: 292 V 294
           V
Sbjct: 168 V 168


>ref|XP_002303022.1| predicted protein [Populus trichocarpa] gi|222844748|gb|EEE82295.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = +1

Query: 127 LITTACASVSGIILLTLSVVNIIQIRIGLYSCGSAESRRAIWALCSIVCIALIIYV 294
           ++ +A  SV G + L LS+VN+IQIR+GL SCGS  +  A+ AL  +V  AL++Y+
Sbjct: 127 MMGSAIGSVMGCVFLMLSMVNVIQIRLGLLSCGSKSTVHAVTALVLLVSSALLVYI 182


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