BLASTX nr result
ID: Cnidium21_contig00027661
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00027661 (443 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a... 78 7e-13 ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002518854.1| ring finger protein, putative [Ricinus commu... 74 2e-11 ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 ref|XP_002867682.1| hypothetical protein ARALYDRAFT_492461 [Arab... 60 1e-07 >ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera] gi|297742383|emb|CBI34532.3| unnamed protein product [Vitis vinifera] Length = 248 Score = 78.2 bits (191), Expect = 7e-13 Identities = 41/96 (42%), Positives = 52/96 (54%) Frame = +3 Query: 156 MGFDPSPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPVL 335 MG +P P HLY +ALQLKLYQA K+RAST S P+L Sbjct: 1 MGLPQTPTPTHLYPEALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASTSSSTAPIL 60 Query: 336 PRTLTQPPPFIISVCEVGFKEELKEKLATVVFDEEL 443 P ++ Q F+ CE+G K ELK KL T++FD+EL Sbjct: 61 PSSMNQAASFLSPSCEIGLKGELKGKLPTILFDDEL 96 >ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|222845224|gb|EEE82771.1| predicted protein [Populus trichocarpa] Length = 310 Score = 76.6 bits (187), Expect = 2e-12 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Frame = +3 Query: 156 MGFDPSPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPVL 335 MG +P PPHLY Q LQLKLYQA K+RAS+ S PP ++ Sbjct: 1 MGIPQAPAPPHLYPQQLQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSISSPPHII 60 Query: 336 PRTLTQPPPF-IISVCEVGFKEELKEKLATVVFDEEL 443 P + Q + S+C++G KEE K+KL V+FDEEL Sbjct: 61 PGSSNQATLYHASSICQIGLKEEFKDKLPIVLFDEEL 97 >ref|XP_002518854.1| ring finger protein, putative [Ricinus communis] gi|223541841|gb|EEF43387.1| ring finger protein, putative [Ricinus communis] Length = 265 Score = 73.6 bits (179), Expect = 2e-11 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Frame = +3 Query: 156 MGFDPSPHP-PHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPV 332 MGF P+ P HLY QALQLKLYQA K+RA++ S P V Sbjct: 1 MGFPPTSSPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATSLSSPSQV 60 Query: 333 LPRTLTQPPPFIISVCEVGFKEELKEKLATVVFDEEL 443 LP + Q + SVC++G K+E+K+KL V+FDE+L Sbjct: 61 LPTSSNQAAQQLPSVCQIGLKKEIKDKLPIVLFDEDL 97 >ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|222841997|gb|EEE79544.1| predicted protein [Populus trichocarpa] Length = 247 Score = 62.8 bits (151), Expect = 3e-08 Identities = 38/96 (39%), Positives = 48/96 (50%) Frame = +3 Query: 156 MGFDPSPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPVL 335 MG SP P HLY Q LQLKLYQA K+R + S PP V+ Sbjct: 1 MGLPQSPTPSHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRTPSLSSPPRVI 60 Query: 336 PRTLTQPPPFIISVCEVGFKEELKEKLATVVFDEEL 443 R+ +Q + +S + KEE+ KL TV+FDEEL Sbjct: 61 QRSSSQATRYHVS--SIYQKEEITNKLPTVLFDEEL 94 >ref|XP_002867682.1| hypothetical protein ARALYDRAFT_492461 [Arabidopsis lyrata subsp. lyrata] gi|297313518|gb|EFH43941.1| hypothetical protein ARALYDRAFT_492461 [Arabidopsis lyrata subsp. lyrata] Length = 174 Score = 60.5 bits (145), Expect = 1e-07 Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 3/96 (3%) Frame = +3 Query: 165 DP-SPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPP-VLP 338 DP SP PHLY QA+QLKLYQA K+RAS+ S P P +LP Sbjct: 3 DPQSPITPHLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILP 62 Query: 339 RTLT-QPPPFIISVCEVGFKEELKEKLATVVFDEEL 443 + + Q + SVC + K ELK+KL V+F+EEL Sbjct: 63 VSSSHQTSSHLPSVCLLDVKVELKDKLHVVLFNEEL 98