BLASTX nr result

ID: Cnidium21_contig00027661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027661
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    78   7e-13
ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...    74   2e-11
ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002867682.1| hypothetical protein ARALYDRAFT_492461 [Arab...    60   1e-07

>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/96 (42%), Positives = 52/96 (54%)
 Frame = +3

Query: 156 MGFDPSPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPVL 335
           MG   +P P HLY +ALQLKLYQA                      K+RAST S   P+L
Sbjct: 1   MGLPQTPTPTHLYPEALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASTSSSTAPIL 60

Query: 336 PRTLTQPPPFIISVCEVGFKEELKEKLATVVFDEEL 443
           P ++ Q   F+   CE+G K ELK KL T++FD+EL
Sbjct: 61  PSSMNQAASFLSPSCEIGLKGELKGKLPTILFDDEL 96


>ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|222845224|gb|EEE82771.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
 Frame = +3

Query: 156 MGFDPSPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPVL 335
           MG   +P PPHLY Q LQLKLYQA                      K+RAS+ S PP ++
Sbjct: 1   MGIPQAPAPPHLYPQQLQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSISSPPHII 60

Query: 336 PRTLTQPPPF-IISVCEVGFKEELKEKLATVVFDEEL 443
           P +  Q   +   S+C++G KEE K+KL  V+FDEEL
Sbjct: 61  PGSSNQATLYHASSICQIGLKEEFKDKLPIVLFDEEL 97


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +3

Query: 156 MGFDPSPHP-PHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPV 332
           MGF P+  P  HLY QALQLKLYQA                      K+RA++ S P  V
Sbjct: 1   MGFPPTSSPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATSLSSPSQV 60

Query: 333 LPRTLTQPPPFIISVCEVGFKEELKEKLATVVFDEEL 443
           LP +  Q    + SVC++G K+E+K+KL  V+FDE+L
Sbjct: 61  LPTSSNQAAQQLPSVCQIGLKKEIKDKLPIVLFDEDL 97


>ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|222841997|gb|EEE79544.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/96 (39%), Positives = 48/96 (50%)
 Frame = +3

Query: 156 MGFDPSPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPPVL 335
           MG   SP P HLY Q LQLKLYQA                      K+R  + S PP V+
Sbjct: 1   MGLPQSPTPSHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRTPSLSSPPRVI 60

Query: 336 PRTLTQPPPFIISVCEVGFKEELKEKLATVVFDEEL 443
            R+ +Q   + +S   +  KEE+  KL TV+FDEEL
Sbjct: 61  QRSSSQATRYHVS--SIYQKEEITNKLPTVLFDEEL 94


>ref|XP_002867682.1| hypothetical protein ARALYDRAFT_492461 [Arabidopsis lyrata subsp.
           lyrata] gi|297313518|gb|EFH43941.1| hypothetical protein
           ARALYDRAFT_492461 [Arabidopsis lyrata subsp. lyrata]
          Length = 174

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = +3

Query: 165 DP-SPHPPHLYSQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKKRASTFSHPPP-VLP 338
           DP SP  PHLY QA+QLKLYQA                      K+RAS+ S P P +LP
Sbjct: 3   DPQSPITPHLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILP 62

Query: 339 RTLT-QPPPFIISVCEVGFKEELKEKLATVVFDEEL 443
            + + Q    + SVC +  K ELK+KL  V+F+EEL
Sbjct: 63  VSSSHQTSSHLPSVCLLDVKVELKDKLHVVLFNEEL 98


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