BLASTX nr result

ID: Cnidium21_contig00027637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027637
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525670.1| ATP-binding cassette transporter, putative [...   135   4e-30
ref|XP_002262619.1| PREDICTED: ABC transporter G family member 1...   133   2e-29
emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera]   133   2e-29
gb|AAP80385.1| ABC transporter [Gossypium hirsutum]                   125   3e-27
ref|XP_002331414.1| white-brown-complex ABC transporter family [...   123   1e-26

>ref|XP_002525670.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223535106|gb|EEF36788.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 705

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = -3

Query: 241 MSNSTNDVMMEIEAHRPQGNGMVVGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 62
           M N+ N  MMEIEA +P GNGM+V  LSPLSETLW+EKTNTE +GDVSARL WKDLTVMV
Sbjct: 1   MRNAANHTMMEIEASKPAGNGMLVAALSPLSETLWREKTNTELVGDVSARLTWKDLTVMV 60

Query: 61  TLGNGETQNVLEGLTGYAEP 2
           TL NGETQNVLEGLTGYAEP
Sbjct: 61  TLSNGETQNVLEGLTGYAEP 80


>ref|XP_002262619.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]
           gi|297737190|emb|CBI26391.3| unnamed protein product
           [Vitis vinifera]
          Length = 705

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = -3

Query: 241 MSNSTNDVMMEIEAHRPQGNGMVVGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 62
           M NS N+ MMEIEA +P   G VVGGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV
Sbjct: 1   MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60

Query: 61  TLGNGETQNVLEGLTGYAEP 2
           TL NGETQ VLEGLTGYAEP
Sbjct: 61  TLSNGETQKVLEGLTGYAEP 80


>emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera]
          Length = 716

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = -3

Query: 241 MSNSTNDVMMEIEAHRPQGNGMVVGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 62
           M NS N+ MMEIEA +P   G VVGGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV
Sbjct: 1   MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60

Query: 61  TLGNGETQNVLEGLTGYAEP 2
           TL NGETQ VLEGLTGYAEP
Sbjct: 61  TLSNGETQKVLEGLTGYAEP 80


>gb|AAP80385.1| ABC transporter [Gossypium hirsutum]
          Length = 705

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = -3

Query: 238 SNSTNDVMMEIEAHRPQGNGMVVGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMVT 59
           ++ +N  MMEI+A++P G GMVVGGLSPLSETLW+EKT+TE +GDVSARL W+DLTVMVT
Sbjct: 3   TSPSNTAMMEIQANKPAGTGMVVGGLSPLSETLWREKTDTELMGDVSARLTWEDLTVMVT 62

Query: 58  LGNGETQNVLEGLTGYAEP 2
           L NG TQ VLEGLTGYAEP
Sbjct: 63  LSNGATQKVLEGLTGYAEP 81


>ref|XP_002331414.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222873628|gb|EEF10759.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 698

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/84 (73%), Positives = 70/84 (83%), Gaps = 7/84 (8%)
 Frame = -3

Query: 232 STNDVMMEIEAHRPQG-------NGMVVGGLSPLSETLWKEKTNTEFIGDVSARLAWKDL 74
           S N V+MEIEA  P G       +G VVGGLSPLSETLW+++T+TEF+GDVSARL WKDL
Sbjct: 6   SPNKVIMEIEASIPSGIVEGIAVDGTVVGGLSPLSETLWRDRTSTEFVGDVSARLTWKDL 65

Query: 73  TVMVTLGNGETQNVLEGLTGYAEP 2
           TVMVTLG+GETQNVLEGLTGYAEP
Sbjct: 66  TVMVTLGSGETQNVLEGLTGYAEP 89


Top