BLASTX nr result

ID: Cnidium21_contig00027636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027636
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525670.1| ATP-binding cassette transporter, putative [...   120   2e-25
ref|XP_002262619.1| PREDICTED: ABC transporter G family member 1...   119   2e-25
emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera]   119   2e-25
gb|AAP80385.1| ABC transporter [Gossypium hirsutum]                   116   2e-24
ref|XP_002331414.1| white-brown-complex ABC transporter family [...   108   6e-22

>ref|XP_002525670.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223535106|gb|EEF36788.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 705

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/76 (72%), Positives = 65/76 (85%)
 Frame = -1

Query: 230 MSSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 51
           M ++ N  MMEI+  +P GNG+++  LSPLSETLW+EKTNTE +GDVSARL WKDLTVMV
Sbjct: 1   MRNAANHTMMEIEASKPAGNGMLVAALSPLSETLWREKTNTELVGDVSARLTWKDLTVMV 60

Query: 50  TLSNGETQNVLQGLTG 3
           TLSNGETQNVL+GLTG
Sbjct: 61  TLSNGETQNVLEGLTG 76


>ref|XP_002262619.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]
           gi|297737190|emb|CBI26391.3| unnamed protein product
           [Vitis vinifera]
          Length = 705

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -1

Query: 230 MSSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 51
           M +S N+ MMEI+  +P   G V+GGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV
Sbjct: 1   MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60

Query: 50  TLSNGETQNVLQGLTG 3
           TLSNGETQ VL+GLTG
Sbjct: 61  TLSNGETQKVLEGLTG 76


>emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera]
          Length = 716

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -1

Query: 230 MSSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 51
           M +S N+ MMEI+  +P   G V+GGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV
Sbjct: 1   MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60

Query: 50  TLSNGETQNVLQGLTG 3
           TLSNGETQ VL+GLTG
Sbjct: 61  TLSNGETQKVLEGLTG 76


>gb|AAP80385.1| ABC transporter [Gossypium hirsutum]
          Length = 705

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/75 (72%), Positives = 65/75 (86%)
 Frame = -1

Query: 227 SSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMVT 48
           +S +N  MMEIQ ++P G G+V+GGLSPLSETLW+EKT+TE +GDVSARL W+DLTVMVT
Sbjct: 3   TSPSNTAMMEIQANKPAGTGMVVGGLSPLSETLWREKTDTELMGDVSARLTWEDLTVMVT 62

Query: 47  LSNGETQNVLQGLTG 3
           LSNG TQ VL+GLTG
Sbjct: 63  LSNGATQKVLEGLTG 77


>ref|XP_002331414.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222873628|gb|EEF10759.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 698

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 7/80 (8%)
 Frame = -1

Query: 221 STNDVMMEIQGHRPQG-------NGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDL 63
           S N V+MEI+   P G       +G V+GGLSPLSETLW+++T+TEF+GDVSARL WKDL
Sbjct: 6   SPNKVIMEIEASIPSGIVEGIAVDGTVVGGLSPLSETLWRDRTSTEFVGDVSARLTWKDL 65

Query: 62  TVMVTLSNGETQNVLQGLTG 3
           TVMVTL +GETQNVL+GLTG
Sbjct: 66  TVMVTLGSGETQNVLEGLTG 85


Top