BLASTX nr result
ID: Cnidium21_contig00027636
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00027636 (509 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002525670.1| ATP-binding cassette transporter, putative [... 120 2e-25 ref|XP_002262619.1| PREDICTED: ABC transporter G family member 1... 119 2e-25 emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera] 119 2e-25 gb|AAP80385.1| ABC transporter [Gossypium hirsutum] 116 2e-24 ref|XP_002331414.1| white-brown-complex ABC transporter family [... 108 6e-22 >ref|XP_002525670.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223535106|gb|EEF36788.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 705 Score = 120 bits (300), Expect = 2e-25 Identities = 55/76 (72%), Positives = 65/76 (85%) Frame = -1 Query: 230 MSSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 51 M ++ N MMEI+ +P GNG+++ LSPLSETLW+EKTNTE +GDVSARL WKDLTVMV Sbjct: 1 MRNAANHTMMEIEASKPAGNGMLVAALSPLSETLWREKTNTELVGDVSARLTWKDLTVMV 60 Query: 50 TLSNGETQNVLQGLTG 3 TLSNGETQNVL+GLTG Sbjct: 61 TLSNGETQNVLEGLTG 76 >ref|XP_002262619.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera] gi|297737190|emb|CBI26391.3| unnamed protein product [Vitis vinifera] Length = 705 Score = 119 bits (299), Expect = 2e-25 Identities = 56/76 (73%), Positives = 65/76 (85%) Frame = -1 Query: 230 MSSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 51 M +S N+ MMEI+ +P G V+GGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV Sbjct: 1 MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60 Query: 50 TLSNGETQNVLQGLTG 3 TLSNGETQ VL+GLTG Sbjct: 61 TLSNGETQKVLEGLTG 76 >emb|CAN69297.1| hypothetical protein VITISV_006943 [Vitis vinifera] Length = 716 Score = 119 bits (299), Expect = 2e-25 Identities = 56/76 (73%), Positives = 65/76 (85%) Frame = -1 Query: 230 MSSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMV 51 M +S N+ MMEI+ +P G V+GGLSPLSETLWKE+T+TEF+GDVSARL WKDLTVMV Sbjct: 1 MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV 60 Query: 50 TLSNGETQNVLQGLTG 3 TLSNGETQ VL+GLTG Sbjct: 61 TLSNGETQKVLEGLTG 76 >gb|AAP80385.1| ABC transporter [Gossypium hirsutum] Length = 705 Score = 116 bits (290), Expect = 2e-24 Identities = 54/75 (72%), Positives = 65/75 (86%) Frame = -1 Query: 227 SSSTNDVMMEIQGHRPQGNGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLTVMVT 48 +S +N MMEIQ ++P G G+V+GGLSPLSETLW+EKT+TE +GDVSARL W+DLTVMVT Sbjct: 3 TSPSNTAMMEIQANKPAGTGMVVGGLSPLSETLWREKTDTELMGDVSARLTWEDLTVMVT 62 Query: 47 LSNGETQNVLQGLTG 3 LSNG TQ VL+GLTG Sbjct: 63 LSNGATQKVLEGLTG 77 >ref|XP_002331414.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222873628|gb|EEF10759.1| white-brown-complex ABC transporter family [Populus trichocarpa] Length = 698 Score = 108 bits (269), Expect = 6e-22 Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 7/80 (8%) Frame = -1 Query: 221 STNDVMMEIQGHRPQG-------NGIVIGGLSPLSETLWKEKTNTEFIGDVSARLAWKDL 63 S N V+MEI+ P G +G V+GGLSPLSETLW+++T+TEF+GDVSARL WKDL Sbjct: 6 SPNKVIMEIEASIPSGIVEGIAVDGTVVGGLSPLSETLWRDRTSTEFVGDVSARLTWKDL 65 Query: 62 TVMVTLSNGETQNVLQGLTG 3 TVMVTL +GETQNVL+GLTG Sbjct: 66 TVMVTLGSGETQNVLEGLTG 85