BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027632
         (2023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]   123   2e-25
emb|CBI14898.3| unnamed protein product [Vitis vinifera]              122   4e-25
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   109   2e-22
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-21
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...   105   6e-20

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score =  123 bits (308), Expect = 2e-25
 Identities = 75/160 (46%), Positives = 95/160 (59%)
 Frame = -3

Query: 1484 FFRKKGKVDFCLFERVYYKNIHTYYDDMAGSKLGFYCPAYVVKAEKSWKLIAAALQSTLG 1305
            F RK+GK+   +  +            MA ++L F  P YV KAEKSWKLIA++LQS LG
Sbjct: 754  FLRKQGKLSSVIVSQ-----------GMAVAELEFQHPDYVSKAEKSWKLIASSLQSILG 802

Query: 1304 CNVEIRINLMGSNSETKSPEVDKLSFGLFSCSRRLQRHSQSTTELGSDPSYNSVSLSEKP 1125
            CNVEIRINL    S     +V K SF  FSCSRR++  S ST+E GSD S  S   SEK 
Sbjct: 803  CNVEIRINLAPCTSVKGYAKVKKPSFSFFSCSRRMRLKSHSTSEHGSDQSDCSDFTSEKA 862

Query: 1124 MIKINEKSTATCSSDSGPQRSRICCHTRETIKTLQDSDAN 1005
            MI+  +K+  TCSSD G Q S +C    E  +TL++ + N
Sbjct: 863  MIR--DKTIGTCSSDCGSQVSHVCYXRTEAARTLRNREGN 900


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  122 bits (306), Expect = 4e-25
 Identities = 75/160 (46%), Positives = 95/160 (59%)
 Frame = -3

Query: 1484 FFRKKGKVDFCLFERVYYKNIHTYYDDMAGSKLGFYCPAYVVKAEKSWKLIAAALQSTLG 1305
            F RK+GK+   +  +            MA ++L F  P YV KAEKSWKLIA++LQS LG
Sbjct: 572  FLRKQGKLSSVIVSQ-----------GMAVAELEFQHPDYVSKAEKSWKLIASSLQSILG 620

Query: 1304 CNVEIRINLMGSNSETKSPEVDKLSFGLFSCSRRLQRHSQSTTELGSDPSYNSVSLSEKP 1125
            CNVEIRINL    S     +V K SF  FSCSRR++  S ST+E GSD S  S   SEK 
Sbjct: 621  CNVEIRINLAPCTSVKGYAKVKKPSFSFFSCSRRMRLKSHSTSEHGSDQSDCSDFTSEKA 680

Query: 1124 MIKINEKSTATCSSDSGPQRSRICCHTRETIKTLQDSDAN 1005
            MI+  +K+  TCSSD G Q S +C    E  +TL++ + N
Sbjct: 681  MIR--DKTIGTCSSDCGSQVSHVCYLRTEAARTLRNREGN 718


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223550389|gb|EEF51876.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1025

 Score =  109 bits (272), Expect(2) = 2e-22
 Identities = 65/134 (48%), Positives = 85/134 (63%)
 Frame = -3

Query: 1406 DMAGSKLGFYCPAYVVKAEKSWKLIAAALQSTLGCNVEIRINLMGSNSETKSPEVDKLSF 1227
            D+A ++L F+ P YV KAEKSWK IA+ALQS LG NVEIRINL+  +S  K  ++ KL F
Sbjct: 734  DLAVAELEFHRPDYVSKAEKSWKTIASALQSILGRNVEIRINLVLCDSALKCKKLRKLPF 793

Query: 1226 GLFSCSRRLQRHSQSTTELGSDPSYNSVSLSEKPMIKINEKSTATCSSDSGPQRSRICCH 1047
             LFSCSRR+ R SQ  TE GSD  Y S  +SEKP+    ++   TCSSD   Q       
Sbjct: 794  SLFSCSRRVLRRSQLPTECGSDSDY-SGHMSEKPI--KGDRVILTCSSDCRSQMPHYIFP 850

Query: 1046 TRETIKTLQDSDAN 1005
              + +K L++++ N
Sbjct: 851  RVDVVKALRNNEGN 864



 Score = 24.6 bits (52), Expect(2) = 2e-22
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -1

Query: 1615 ESLKHIVTCARGKFLAKWGYECREGNAGICLE*RA*IEPRSLQSFSEKKEKLTSVCLKE 1439
            ESLK ++ C+        G +C+     I        +  SL++F  K+ KL+S+C+ +
Sbjct: 675  ESLKLLLPCSCEDGKLHNGGDCKATLESIWKNATELCQSNSLRNFLGKQGKLSSLCVNQ 733


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  110 bits (275), Expect = 1e-21
 Identities = 69/162 (42%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
 Frame = -3

Query: 1484 FFRKKGKVDFCLFERVYYKNIHTYYDDMAGSKLGFYCPAYVVKAEKSWKLIAAALQSTLG 1305
            F RK+GK+    F++            +A ++L F+ P Y  KAEKSWK IA++LQ+ LG
Sbjct: 720  FLRKQGKLSSLHFDK-----------GLAVAELEFHHPNYASKAEKSWKFIASSLQTVLG 768

Query: 1304 CNVEIRINLMGSNSETKSPEVDKLSFGLFSCSR--RLQRHSQSTTELGSDPSYNSVSLSE 1131
            CNVEIRINL+     +K  ++ +LSF LF CSR  R + H       GSD  Y S  +SE
Sbjct: 769  CNVEIRINLVVCAPVSKCAKLRRLSFSLFGCSRITRHKSHPPMECGCGSDSDY-SDHISE 827

Query: 1130 KPMIKINEKSTATCSSDSGPQRSRICCHTRETIKTLQDSDAN 1005
            KPMI+  EK+ + C SD G Q    C H  E  K L++S+ N
Sbjct: 828  KPMIR--EKAISACPSDCGSQIPHSCYHRVEVGKALRNSEGN 867


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
            predicted protein [Populus trichocarpa]
          Length = 907

 Score =  105 bits (261), Expect = 6e-20
 Identities = 66/161 (40%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
 Frame = -3

Query: 1484 FFRKKGKVDFCLFERVYYKNIHTYYDDMAGSKLGFYCPAYVVKAEKSWKLIAAALQSTLG 1305
            F RK+GK+      R            +A ++L F+   Y  KAEKSWKLIA+ LQ+ LG
Sbjct: 663  FLRKQGKLSSLHINR-----------GLAVAELEFHHSDYASKAEKSWKLIASLLQTILG 711

Query: 1304 CNVEIRINL-MGSNSETKSPEVDKLSFGLFSCSRRLQRHSQSTTELGSDPSYNSVSLSEK 1128
            CNVEIRINL + +   +K  ++ K SF  F CSRR++  SQ   E G D  Y S  +SE+
Sbjct: 712  CNVEIRINLVLCTPPASKCAKLWKQSFCFFGCSRRMRHKSQPPIECGIDSDY-SDHISER 770

Query: 1127 PMIKINEKSTATCSSDSGPQRSRICCHTRETIKTLQDSDAN 1005
            PMI+  E++ + C SDS  Q    C H  E ++ L++S+ N
Sbjct: 771  PMIR--ERAISACPSDSRSQIPHNCYHRAEVVRALRNSEGN 809