BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027619
         (2163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   305   e-159
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   303   e-157
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   291   e-153
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   300   e-151
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   284   e-144

>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  305 bits (781), Expect(3) = e-159
 Identities = 155/288 (53%), Positives = 195/288 (67%), Gaps = 5/288 (1%)
 Frame = -3

Query: 2152 VSGMGESTEDSSSSEPGRFRLISDVYNDTEEVELSDE-----LLFLGIEEPENFEQATKE 1988
            V+  G S +  S   P RFR + D+  +   V+L ++      L   +EEP ++ +A  +
Sbjct: 865  VASPGSSGDLRSDEGPVRFRSLEDIMREAPRVDLVEDEHDGDALLAEMEEPSSYREAAGQ 924

Query: 1987 PVWKKAMQSEMNAIEKNKTWILTDLPPERKAISLKWVYKLKKNTDGEIVKYKARIVARGF 1808
            P W+ AM  E+ AIEKN TW LT LP   K I LKWVYKLKKNT GE++K+KAR+VA+G+
Sbjct: 925  PAWENAMAQELQAIEKNSTWALTALPAGHKPIGLKWVYKLKKNTAGEVIKHKARLVAKGY 984

Query: 1807 VQKKGVDFEEVFXXXXXXXXXXXXXXXXAKNGWEVHHLDIKSAFLNGDLIEEVYVSQPEG 1628
            VQ++GVDFEEVF                A   WEVHHLD+KSAFLNGDL EEVYV+QPEG
Sbjct: 985  VQRQGVDFEEVFAPVARLDTVRVILAIAADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEG 1044

Query: 1627 FVNEKKRHKVYRLLKALYGLRQAPRAWYARLNKCLKDFGFSKCPYKHAVYTKREGDEFLI 1448
            FV   + H V RL KALYGLRQAPRAW  RL+KCLK+ GF++C  + AVYT+ +G   +I
Sbjct: 1045 FVKRGEEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAGVI 1104

Query: 1447 VAVYVDDLLVTGSSMKNILKFKREMGKEFEMSDMGKLSYY*GIEVHQG 1304
            V VYVDDL+VTG + + I  FK++M  EFEMSD+G LSYY GIEV QG
Sbjct: 1105 VGVYVDDLIVTGENPQEIAMFKQQMMGEFEMSDLGLLSYYLGIEVIQG 1152



 Score =  266 bits (681), Expect(3) = e-159
 Identities = 129/228 (56%), Positives = 169/228 (74%)
 Frame = -2

Query: 1205 GRMVNATEYMSMVGGLRYLVHTRPDLAYAVGVISRYMERPTVMHHNAAKRIMRYISGTLN 1026
            G  ++ATEY  ++G LRYL+HTRPDL+YAVGV SR+MERPT MH  A K I+RY+ GTL+
Sbjct: 1195 GNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLD 1254

Query: 1025 FGLVYSKGVGNYILSRYSDSNLVGDIDDRKSTWGVAFYLNDNLITWVSQKQRCVALSSCE 846
             GLV++ G G+  ++ ++DS+L GD+DDR+ST G+AFY+N +L++W SQKQ+ VALSSCE
Sbjct: 1255 SGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCE 1314

Query: 845  AEFMXXXXXACQGVWLRNLLRQITDMGDAPVVIYVDNKSAIDLTKNPVFRGRSKHIDIRY 666
            AEFM     AC  +WLR LL ++      PV ++VDNKSAI L KNPVF GRSKHID RY
Sbjct: 1315 AEFMAATAAACHALWLRALLSEMMGTEAKPVKLFVDNKSAIALMKNPVFHGRSKHIDTRY 1374

Query: 665  HFIRDCIERGEINVKHVCTAEHRADVLTKVMQKTKFEEMRTLLGVRNL 522
            HFIR+C+E G+I ++ V + E RAD +TK +   K    R LLGVR+L
Sbjct: 1375 HFIRECVESGQILIEFVSSEEQRADAMTKGLPAAKLATARHLLGVRDL 1422



 Score = 41.6 bits (96), Expect(3) = e-159
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -1

Query: 1305 AYAKKLLEQANMKGCNSVRYPMEPKEALNRD 1213
            AYAKK+L Q  M+GCN    PMEP+  L++D
Sbjct: 1162 AYAKKILSQFGMQGCNPTSIPMEPRSLLHKD 1192


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  303 bits (775), Expect(3) = e-157
 Identities = 154/288 (53%), Positives = 193/288 (67%), Gaps = 5/288 (1%)
 Frame = -3

Query: 2152 VSGMGESTEDSSSSEPGRFRLISDVYNDTEEVELSDE-----LLFLGIEEPENFEQATKE 1988
            V+  G   +  S   P RFR + D+  +   V+L ++      L   +EEP ++ +A  +
Sbjct: 865  VASPGSGGDLRSDEGPVRFRSLEDIMREAPRVDLVEDEHDGDALLAEMEEPSSYREAAGQ 924

Query: 1987 PVWKKAMQSEMNAIEKNKTWILTDLPPERKAISLKWVYKLKKNTDGEIVKYKARIVARGF 1808
            P W+ AM  E+ AIEKN TW LT LP   K I LKWVYKLKKNT GE++K+KAR+VA+G+
Sbjct: 925  PAWENAMAQELQAIEKNSTWALTALPAGHKPIGLKWVYKLKKNTAGEVIKHKARLVAKGY 984

Query: 1807 VQKKGVDFEEVFXXXXXXXXXXXXXXXXAKNGWEVHHLDIKSAFLNGDLIEEVYVSQPEG 1628
            VQ++GVDFEEVF                A   WEVHHLD+KSAFLNGDL EEVYV+QPEG
Sbjct: 985  VQRQGVDFEEVFAPVARLDTVRVILAIAADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEG 1044

Query: 1627 FVNEKKRHKVYRLLKALYGLRQAPRAWYARLNKCLKDFGFSKCPYKHAVYTKREGDEFLI 1448
            FV   + H V RL KALYGLRQAPRAW  RL+KCLK+ GF++C  + AVYT+ +G   +I
Sbjct: 1045 FVKRGEEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAGVI 1104

Query: 1447 VAVYVDDLLVTGSSMKNILKFKREMGKEFEMSDMGKLSYY*GIEVHQG 1304
            V VYVDDL+VTG +   I  FK++M  EFEMSD+G LSYY GIEV QG
Sbjct: 1105 VGVYVDDLIVTGENPHEIAMFKQQMMGEFEMSDLGLLSYYLGIEVIQG 1152



 Score =  262 bits (670), Expect(3) = e-157
 Identities = 128/228 (56%), Positives = 168/228 (73%)
 Frame = -2

Query: 1205 GRMVNATEYMSMVGGLRYLVHTRPDLAYAVGVISRYMERPTVMHHNAAKRIMRYISGTLN 1026
            G  ++ATEY  ++G LRYL+HTRPDL+YAVGV SR+MERPT MH  A K I+RY+ GTL+
Sbjct: 1195 GNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLD 1254

Query: 1025 FGLVYSKGVGNYILSRYSDSNLVGDIDDRKSTWGVAFYLNDNLITWVSQKQRCVALSSCE 846
             GLV++ G G+  ++ ++DS+L GD+DDR+ST G+AFY+N +L++W SQKQ+ VALSSCE
Sbjct: 1255 SGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCE 1314

Query: 845  AEFMXXXXXACQGVWLRNLLRQITDMGDAPVVIYVDNKSAIDLTKNPVFRGRSKHIDIRY 666
            AEFM     AC  +WLR LL ++       V ++VDNKSAI L KNPVF GRSKHID RY
Sbjct: 1315 AEFMAATAAACHALWLRALLSEMMGTEAKRVKLFVDNKSAIALMKNPVFHGRSKHIDTRY 1374

Query: 665  HFIRDCIERGEINVKHVCTAEHRADVLTKVMQKTKFEEMRTLLGVRNL 522
            HFIR+C+E G+I ++ V + E RAD +TK +   K    R LLGVR+L
Sbjct: 1375 HFIRECVESGQILIEFVRSEEQRADAMTKGLPAAKLATARHLLGVRDL 1422



 Score = 41.6 bits (96), Expect(3) = e-157
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -1

Query: 1305 AYAKKLLEQANMKGCNSVRYPMEPKEALNRD 1213
            AYAKK+L Q  M+GCN    PMEP+  L++D
Sbjct: 1162 AYAKKILSQFGMQGCNPTSIPMEPRSLLHKD 1192


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  291 bits (746), Expect(2) = e-153
 Identities = 149/282 (52%), Positives = 192/282 (68%), Gaps = 7/282 (2%)
 Frame = -3

Query: 2131 TEDSSSSEPG--RFRLISDVYNDTEEVELSD-----ELLFLGIEEPENFEQATKEPVWKK 1973
            T+D+  ++ G  R+R ++DV  +   V+L +     E L    EEP ++ +A  +P W++
Sbjct: 852  TDDNIDTDDGPRRYRSLADVLREAPRVDLVEDECDGEALLAESEEPSSYREAAGQPAWEE 911

Query: 1972 AMQSEMNAIEKNKTWILTDLPPERKAISLKWVYKLKKNTDGEIVKYKARIVARGFVQKKG 1793
            AMQ EM AIEKNKTW L  LP   +AI LKWVYKLKKNT GEI+K+KAR+VA+G+VQK+G
Sbjct: 912  AMQREMEAIEKNKTWELAMLPAGHRAIGLKWVYKLKKNTAGEIIKHKARLVAKGYVQKQG 971

Query: 1792 VDFEEVFXXXXXXXXXXXXXXXXAKNGWEVHHLDIKSAFLNGDLIEEVYVSQPEGFVNEK 1613
            VDFEEVF                A   W+VHHLD+KSAFLNG+L EEVYV+QPEGF    
Sbjct: 972  VDFEEVFAPVARLDTVRVVLAVAADRRWQVHHLDVKSAFLNGELEEEVYVAQPEGFARSG 1031

Query: 1612 KRHKVYRLLKALYGLRQAPRAWYARLNKCLKDFGFSKCPYKHAVYTKREGDEFLIVAVYV 1433
            K H V +L KALYGLRQAPRAW  RL++ L++ GF +C  + AVYT+  G + +IV VYV
Sbjct: 1032 KEHLVLKLHKALYGLRQAPRAWNIRLDRSLRELGFDRCTQEQAVYTRGRGSDGIIVGVYV 1091

Query: 1432 DDLLVTGSSMKNILKFKREMGKEFEMSDMGKLSYY*GIEVHQ 1307
            DDL+VTG +   +  FK +M  EFEMSD+G L+YY GIEV Q
Sbjct: 1092 DDLIVTGENPSELKVFKEQMMGEFEMSDLGLLTYYLGIEVDQ 1133



 Score =  278 bits (712), Expect(2) = e-153
 Identities = 136/242 (56%), Positives = 180/242 (74%)
 Frame = -2

Query: 1247 IPWNRKRRSTEMKKGRMVNATEYMSMVGGLRYLVHTRPDLAYAVGVISRYMERPTVMHHN 1068
            IP + + + ++  +G  V+ATEY  ++G LRYL+HTRPDL+YAVGV SR+MERPTVMH  
Sbjct: 1163 IPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVGVASRFMERPTVMHFK 1222

Query: 1067 AAKRIMRYISGTLNFGLVYSKGVGNYILSRYSDSNLVGDIDDRKSTWGVAFYLNDNLITW 888
            A K+I+RYI GT+++GLVY+ G G   ++ Y+DS+L GD+DDR+ST G+AFY+N +L+ W
Sbjct: 1223 AVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGMAFYINQSLVAW 1282

Query: 887  VSQKQRCVALSSCEAEFMXXXXXACQGVWLRNLLRQITDMGDAPVVIYVDNKSAIDLTKN 708
             SQKQ+ VALSSCEAEFM     ACQ +WLR LL ++  + +  V ++VDN+SAI L KN
Sbjct: 1283 SSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAVKLFVDNRSAIALMKN 1342

Query: 707  PVFRGRSKHIDIRYHFIRDCIERGEINVKHVCTAEHRADVLTKVMQKTKFEEMRTLLGVR 528
            PVF GRSKHID RYHFIR+C++ G+I V+ V T E RAD LTK +   K    R LLGVR
Sbjct: 1343 PVFHGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQRADALTKGLPAAKLVTARHLLGVR 1402

Query: 527  NL 522
            +L
Sbjct: 1403 SL 1404


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108710383|gb|ABF98178.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  300 bits (768), Expect(2) = e-151
 Identities = 148/276 (53%), Positives = 192/276 (69%), Gaps = 5/276 (1%)
 Frame = -3

Query: 2119 SSSEPGRFRLISDVYNDTEEVELSD-----ELLFLGIEEPENFEQATKEPVWKKAMQSEM 1955
            S  EP R+R ++++  +   V+L +     E L + +EEP ++ +A  EP W  AM  E+
Sbjct: 831  SDDEPVRYRSLAEIMIEAPRVDLVEDDDDTEALLVEMEEPTSYREAAGEPAWVNAMNKEL 890

Query: 1954 NAIEKNKTWILTDLPPERKAISLKWVYKLKKNTDGEIVKYKARIVARGFVQKKGVDFEEV 1775
             AIEKNKTW L  LP   KAI LKWV+KLKKNT GE++K+KAR+VA+G+VQ++GVDF+EV
Sbjct: 891  EAIEKNKTWSLCMLPASHKAIGLKWVFKLKKNTAGEVIKHKARLVAKGYVQRQGVDFDEV 950

Query: 1774 FXXXXXXXXXXXXXXXXAKNGWEVHHLDIKSAFLNGDLIEEVYVSQPEGFVNEKKRHKVY 1595
            F                    W+VHHLD+KSAFLNGDL EEVYVSQPEGFV + K H VY
Sbjct: 951  FAPVARLDTVRAILPVAVDRRWQVHHLDVKSAFLNGDLEEEVYVSQPEGFVEKGKEHLVY 1010

Query: 1594 RLLKALYGLRQAPRAWYARLNKCLKDFGFSKCPYKHAVYTKREGDEFLIVAVYVDDLLVT 1415
            +L KALYGLRQAPRAW  RL++ +K+ GFS+C  + AVYT+  G   +IV VYVDDL+VT
Sbjct: 1011 KLSKALYGLRQAPRAWNTRLDRSMKELGFSRCAQEQAVYTRGTGSTGIIVGVYVDDLIVT 1070

Query: 1414 GSSMKNILKFKREMGKEFEMSDMGKLSYY*GIEVHQ 1307
            G S  +I  FK++M  EFEMSD+G L+YY GIE+H+
Sbjct: 1071 GESPSDITAFKQQMMGEFEMSDLGLLTYYLGIELHK 1106



 Score =  263 bits (673), Expect(2) = e-151
 Identities = 130/228 (57%), Positives = 166/228 (72%)
 Frame = -2

Query: 1208 KGRMVNATEYMSMVGGLRYLVHTRPDLAYAVGVISRYMERPTVMHHNAAKRIMRYISGTL 1029
            +G  V+ TEY  ++G LRYL+HTRPDL+YAVGV SR+MERPTVMH  A K+I+RY+ GT+
Sbjct: 1109 QGSTVDPTEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTVMHFKAVKQILRYLKGTI 1168

Query: 1028 NFGLVYSKGVGNYILSRYSDSNLVGDIDDRKSTWGVAFYLNDNLITWVSQKQRCVALSSC 849
            N GL++S G G   ++ ++DS+L GD DDR+ST G+AFY N +L++W SQKQ+ VALSSC
Sbjct: 1169 NCGLMFSGGNGAVEITGFTDSDLAGDSDDRRSTSGMAFYFNGSLVSWSSQKQKTVALSSC 1228

Query: 848  EAEFMXXXXXACQGVWLRNLLRQITDMGDAPVVIYVDNKSAIDLTKNPVFRGRSKHIDIR 669
            EAEFM     AC  +WLR LL ++      PV +YVDNKSAI L KNPVF GRSKHID R
Sbjct: 1229 EAEFMAATAAACHALWLRGLLIEMIGAEARPVKLYVDNKSAIALMKNPVFHGRSKHIDTR 1288

Query: 668  YHFIRDCIERGEINVKHVCTAEHRADVLTKVMQKTKFEEMRTLLGVRN 525
            YHFIR+C+E G+I ++ V   E RAD LTK +   +    R LLGVR+
Sbjct: 1289 YHFIRECVESGKIQIEFVRIEEQRADALTKGLPAARLATARHLLGVRD 1336


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  284 bits (726), Expect(2) = e-144
 Identities = 145/277 (52%), Positives = 185/277 (66%), Gaps = 4/277 (1%)
 Frame = -3

Query: 2119 SSSEPGRFRLISDVYNDTEEVELSDE----LLFLGIEEPENFEQATKEPVWKKAMQSEMN 1952
            S   P R+R ++D+  +   V+L DE     L    EEP ++ +A  EP W  AMQ E+ 
Sbjct: 773  SDDGPLRYRSLADIMLEAPRVDLVDEEDGEALLAETEEPSSYREAAGEPAWVDAMQKELE 832

Query: 1951 AIEKNKTWILTDLPPERKAISLKWVYKLKKNTDGEIVKYKARIVARGFVQKKGVDFEEVF 1772
            AIEKN TW L  LP   KAI LKWV++LKKNT GE++K+KA +VA+G+VQ+ GVDFEEVF
Sbjct: 833  AIEKNSTWSLCTLPVGHKAIGLKWVFELKKNTTGEVIKHKAWLVAKGYVQRHGVDFEEVF 892

Query: 1771 XXXXXXXXXXXXXXXXAKNGWEVHHLDIKSAFLNGDLIEEVYVSQPEGFVNEKKRHKVYR 1592
                            A  GW VHHLD+KSAFLNG+L EEVYV+Q EGF+ + + H V +
Sbjct: 893  APVARLDTVRTILAVAADRGWRVHHLDVKSAFLNGELEEEVYVAQLEGFIKKGQEHLVLK 952

Query: 1591 LLKALYGLRQAPRAWYARLNKCLKDFGFSKCPYKHAVYTKREGDEFLIVAVYVDDLLVTG 1412
            L KALYGLRQAPRAW   L+K LK+ GF +C  + AVYT+  G E +IV VYVDDL+VTG
Sbjct: 953  LSKALYGLRQAPRAWNICLDKSLKELGFMRCKQEQAVYTRGRGAEAMIVGVYVDDLIVTG 1012

Query: 1411 SSMKNILKFKREMGKEFEMSDMGKLSYY*GIEVHQGI 1301
             +   +  FK++M  EFEM+D+G LSYY GIEV QG+
Sbjct: 1013 ENPARVEAFKKQMMGEFEMNDLGLLSYYLGIEVGQGV 1049



 Score =  257 bits (657), Expect(2) = e-144
 Identities = 130/238 (54%), Positives = 171/238 (71%), Gaps = 3/238 (1%)
 Frame = -2

Query: 1226 RSTEMKK---GRMVNATEYMSMVGGLRYLVHTRPDLAYAVGVISRYMERPTVMHHNAAKR 1056
            + T+++K   G  V+A EY  ++G LRYL+HTRPDL+YAVGV SR+ME PT+ H  A K+
Sbjct: 1061 KKTQLQKDADGHPVDAIEYRRVIGCLRYLLHTRPDLSYAVGVASRFMEHPTMTHLKAVKQ 1120

Query: 1055 IMRYISGTLNFGLVYSKGVGNYILSRYSDSNLVGDIDDRKSTWGVAFYLNDNLITWVSQK 876
            I+RY+ GT++ GLVY+ G+G   ++ Y+DS+L GD+DDR+ST G+AFY+N++L+ W SQK
Sbjct: 1121 ILRYLKGTIDCGLVYTAGIGEITITGYTDSDLAGDVDDRRSTGGMAFYINNSLVAWSSQK 1180

Query: 875  QRCVALSSCEAEFMXXXXXACQGVWLRNLLRQITDMGDAPVVIYVDNKSAIDLTKNPVFR 696
            Q+ V LSSCEAEFM     AC  +WLR LL ++       V ++VDNKSAI L KNPVFR
Sbjct: 1181 QKTVTLSSCEAEFMAATAAACHALWLRALLGELLGEEAKLVKLFVDNKSAIALMKNPVFR 1240

Query: 695  GRSKHIDIRYHFIRDCIERGEINVKHVCTAEHRADVLTKVMQKTKFEEMRTLLGVRNL 522
            GRSKHID RY FIR+CIER +I V+ V + E RAD LTK +   K    R LL VR+L
Sbjct: 1241 GRSKHIDTRYQFIRECIERRQILVEFVRSEEQRADALTKGLPAAKLVTARFLLRVRDL 1298