BLASTX nr result
ID: Cnidium21_contig00027601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00027601
(594 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric... 59 9e-18
ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|2... 62 4e-17
ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|2... 57 7e-17
ref|XP_003630042.1| SPA1-like protein [Medicago truncatula] gi|3... 57 1e-16
ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|3... 57 1e-16
>ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223526576|gb|EEF28831.1| ubiquitin ligase protein
cop1, putative [Ricinus communis]
Length = 889
Score = 58.5 bits (140), Expect(2) = 9e-18
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = -2
Query: 320 LLMKWPKEASFCLWLLHPQPTSRPKM 243
LL+KWPKEASFCLWLLHP+P+SRPKM
Sbjct: 304 LLLKWPKEASFCLWLLHPEPSSRPKM 329
Score = 57.0 bits (136), Expect(2) = 9e-18
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -3
Query: 448 PEEVTGAPSSCASDIYRLGVLLFELYCMF 362
PEE TG+PSSCASDIYRLGVLLFEL+C F
Sbjct: 254 PEEATGSPSSCASDIYRLGVLLFELFCPF 282
>ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1|
predicted protein [Populus trichocarpa]
Length = 857
Score = 62.0 bits (149), Expect(2) = 4e-17
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Frame = -2
Query: 320 LLMKWPKEASFCLWLLHPQPTSRPKMGVI--------PRTLMTREITGVTVGE------- 186
LL+KWPKEASFCLWLLHP+P+SRPKMG + PR + + + E
Sbjct: 271 LLLKWPKEASFCLWLLHPEPSSRPKMGELLQSEFLNEPRDYLEEREAAIQLRERIEEQEL 330
Query: 185 -VRAVSDMHQRKAEMARQADAFIAL 114
+ + M QRK + A + ++L
Sbjct: 331 LLEFLLPMQQRKQDAANKLQGTVSL 355
Score = 51.2 bits (121), Expect(2) = 4e-17
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -3
Query: 448 PEEVTGAPSSCASDIYRLGVLLFELYCMF 362
PEEV G+PSSCASDIY+LGVLLFEL+ F
Sbjct: 221 PEEVAGSPSSCASDIYQLGVLLFELFSPF 249
>ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1|
predicted protein [Populus trichocarpa]
Length = 851
Score = 57.4 bits (137), Expect(3) = 7e-17
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = -2
Query: 320 LLMKWPKEASFCLWLLHPQPTSRPKMGVIPRTLMTREITGVTVGEVRAVSDMHQRKAE 147
LL+KW KEASFCLWLLHP+P+SRPK+G + ++ E + E+ A + + +R E
Sbjct: 273 LLLKWSKEASFCLWLLHPEPSSRPKIGELLQSDFLNEPIN-NLEELEAATQLRERIEE 329
Score = 53.9 bits (128), Expect(3) = 7e-17
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = -3
Query: 448 PEEVTGAPSSCASDIYRLGVLLFELYCMF 362
PEE G+PSSCASDIYRLGVLLFEL+C F
Sbjct: 223 PEEDAGSPSSCASDIYRLGVLLFELFCPF 251
Score = 20.8 bits (42), Expect(3) = 7e-17
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 363 SEEKCGTMSNLIHR 322
SE+K TMS+L HR
Sbjct: 254 SEDKSRTMSSLRHR 267
>ref|XP_003630042.1| SPA1-like protein [Medicago truncatula] gi|355524064|gb|AET04518.1|
SPA1-like protein [Medicago truncatula]
Length = 814
Score = 57.0 bits (136), Expect(3) = 1e-16
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2
Query: 320 LLMKWPKEASFCLWLLHPQPTSRPKMGVIPRTLMTR 213
LL+KWPKEASFCLWLLHP P+SRP +G + + R
Sbjct: 301 LLLKWPKEASFCLWLLHPDPSSRPTLGSLQGVVAER 336
Score = 54.3 bits (129), Expect(3) = 1e-16
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = -3
Query: 505 GSIASFNRSEALVI*VVNY--PEEVTGAPSSCASDIYRLGVLLFELYC 368
G SF + L++ + Y PEEV G PSSCASD+YRLG+LLFEL+C
Sbjct: 230 GKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFC 277
Score = 20.4 bits (41), Expect(3) = 1e-16
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 360 EEKCGTMSNLIHR 322
EEK TMS+L HR
Sbjct: 283 EEKSRTMSSLRHR 295
>ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|355485799|gb|AES67002.1|
SPA1-like protein [Medicago truncatula]
Length = 875
Score = 56.6 bits (135), Expect(3) = 1e-16
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -2
Query: 320 LLMKWPKEASFCLWLLHPQPTSRPKMG 240
LL+KWPKEASFCLWLLHP P+SRP +G
Sbjct: 301 LLLKWPKEASFCLWLLHPDPSSRPTLG 327
Score = 54.3 bits (129), Expect(3) = 1e-16
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = -3
Query: 505 GSIASFNRSEALVI*VVNY--PEEVTGAPSSCASDIYRLGVLLFELYC 368
G SF + L++ + Y PEEV G PSSCASD+YRLG+LLFEL+C
Sbjct: 230 GKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFC 277
Score = 20.4 bits (41), Expect(3) = 1e-16
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 360 EEKCGTMSNLIHR 322
EEK TMS+L HR
Sbjct: 283 EEKSRTMSSLRHR 295