BLASTX nr result

ID: Cnidium21_contig00027588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027588
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34809.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_003631396.1| PREDICTED: armadillo repeat-containing kines...    74   9e-12
emb|CBI34812.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_004147564.1| PREDICTED: armadillo repeat-containing kines...    72   5e-11
ref|XP_002302540.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>emb|CBI34809.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
 Frame = +1

Query: 151 QMASSSNIYRNNNHRNAMKIDRTLTPSSNLRASTSFKSK---LTPSNSNVRRSTPAFISG 321
           +MA+S   YRN  H+  MK+DR ++ SS  ++S S KSK    +P++S +RR++   + G
Sbjct: 71  KMAASGG-YRNGTHKGNMKVDRLVSLSSATKSS-SLKSKPSPASPASSGLRRNSTGSVGG 128

Query: 322 SSRPHDSISGRVRVAVRLRPRNAEELVADADF 417
           + +    + GRVRVAVRLRPRNAEELVADADF
Sbjct: 129 A-KDDAGVPGRVRVAVRLRPRNAEELVADADF 159


>ref|XP_003631396.1| PREDICTED: armadillo repeat-containing kinesin-like protein 3-like
           [Vitis vinifera]
          Length = 779

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
 Frame = +1

Query: 160 SSSNIYRNNNHRNAMKIDRTLTPSSNLRASTSFKSK---LTPSNSNVRRSTPAFISGSSR 330
           ++S  YRN  H+  MK+DR ++ SS  ++S S KSK    +P++S +RR++   + G+ +
Sbjct: 2   AASGGYRNGTHKGNMKVDRLVSLSSATKSS-SLKSKPSPASPASSGLRRNSTGSVGGA-K 59

Query: 331 PHDSISGRVRVAVRLRPRNAEELVADADF 417
               + GRVRVAVRLRPRNAEE VADADF
Sbjct: 60  DDAGVPGRVRVAVRLRPRNAEESVADADF 88


>emb|CBI34812.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
 Frame = +1

Query: 160 SSSNIYRNNNHRNAMKIDRTLTPSSNLRASTSFKSK---LTPSNSNVRRSTPAFISGSSR 330
           ++S  YRN  H+  MK+DR ++ SS  ++S S KSK    +P++S +RR++   + G+ +
Sbjct: 2   AASGGYRNGTHKGNMKVDRLVSLSSATKSS-SLKSKPSPASPASSGLRRNSTGSVGGA-K 59

Query: 331 PHDSISGRVRVAVRLRPRNAEELVADADF 417
               + GRVRVAVRLRPRNAEE VADADF
Sbjct: 60  DDAGVPGRVRVAVRLRPRNAEESVADADF 88


>ref|XP_004147564.1| PREDICTED: armadillo repeat-containing kinesin-like protein 3-like
           [Cucumis sativus] gi|449513383|ref|XP_004164312.1|
           PREDICTED: armadillo repeat-containing kinesin-like
           protein 3-like [Cucumis sativus]
          Length = 906

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +1

Query: 157 ASSSNIYRNN-NHRNAMKIDRTLTPSSNLRASTSFKSKLTPSNSNVRRSTPAFISGSSRP 333
           AS    YRN    RN++K+D+  + +S+  + +S KSK  P NS +RRS+PA + G ++ 
Sbjct: 3   ASGGTSYRNGATSRNSLKLDKPFSANSS-NSKSSLKSKSLP-NSALRRSSPAAL-GVAKD 59

Query: 334 HDSISGRVRVAVRLRPRNAEELVADADF 417
              + GRVRVAVRLRPRN EE +ADADF
Sbjct: 60  DGGVPGRVRVAVRLRPRNTEESIADADF 87


>ref|XP_002302540.1| predicted protein [Populus trichocarpa] gi|222844266|gb|EEE81813.1|
           predicted protein [Populus trichocarpa]
          Length = 907

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
 Frame = +1

Query: 157 ASSSNIYRNNNHRNAMKIDRTLTPSSNLRASTSFKSKLTPSNS---NVRRSTPAFISGSS 327
           +SSSN    N   +A +  + LT +SNL++S SFKS++ PS++   + RRS P+  S S 
Sbjct: 5   SSSSNSAFRNGSSSAQRPLKPLT-ASNLKSS-SFKSRVHPSHAPPPSFRRSYPSTFSASD 62

Query: 328 RPHDSISGRVRVAVRLRPRNAEELVADADF 417
              D + GRVRVAVRLRPRNAEEL ADADF
Sbjct: 63  ---DGVPGRVRVAVRLRPRNAEELAADADF 89


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