BLASTX nr result

ID: Cnidium21_contig00027577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027577
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB52073.1| putative lycopene epsilon cyclase [Daucus carota ...   108   6e-22
gb|AAF34191.1| lycopene epsilon cyclase [Daucus carota]               101   7e-20
dbj|BAF49056.1| lycopene epsilon-cyclase [Prunus mume]                 97   2e-18
ref|XP_002514136.1| Lycopene epsilon cyclase, chloroplast precur...    96   4e-18
gb|AFP28798.1| lycopene epsilon-cyclase 1 [Vitis vinifera]             92   6e-17

>gb|ABB52073.1| putative lycopene epsilon cyclase [Daucus carota subsp. sativus]
          Length = 530

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/84 (69%), Positives = 62/84 (73%), Gaps = 12/84 (14%)
 Frame = -3

Query: 236 VENNLYDPSLMGIMDYRDYTNEKVPGMETEYPMFLY------------ETGLASKDAISF 93
           VENN YDPSLM  MDYRDYT +KVPGME EYP FLY            ET LASKDA+ F
Sbjct: 273 VENNPYDPSLMVFMDYRDYTKQKVPGMEAEYPTFLYVMPMSPTRIFFEETCLASKDAMPF 332

Query: 92  DLLKKKLMSRLHTMGIQVAKTCEK 21
           DLLKKKLMSRL TMGI+VAKT E+
Sbjct: 333 DLLKKKLMSRLQTMGIRVAKTYEE 356


>gb|AAF34191.1| lycopene epsilon cyclase [Daucus carota]
          Length = 201

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/79 (68%), Positives = 58/79 (73%), Gaps = 12/79 (15%)
 Frame = -3

Query: 221 YDPSLMGIMDYRDYTNEKVPGMETEYPMFLY------------ETGLASKDAISFDLLKK 78
           YDPSLM  MDYRDYT +KVPGME EYP FLY            ET LASKDA+ FDLLKK
Sbjct: 97  YDPSLMVFMDYRDYTKQKVPGMEAEYPTFLYVMPMSPTRIFFEETCLASKDAMPFDLLKK 156

Query: 77  KLMSRLHTMGIQVAKTCEK 21
           KLMSRL TMGI+VAKT E+
Sbjct: 157 KLMSRLQTMGIRVAKTYEE 175


>dbj|BAF49056.1| lycopene epsilon-cyclase [Prunus mume]
          Length = 238

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 12/88 (13%)
 Frame = -3

Query: 236 VENNLYDPSLMGIMDYRDYTNEKVPGMETEYPMFLY------------ETGLASKDAISF 93
           VENN YDP+LM  MDYRDYT +KV  +E EYP FLY            ET LASK+A+ F
Sbjct: 33  VENNPYDPNLMVFMDYRDYTKQKVSSLEAEYPTFLYAMPMSPTRFFFEETCLASKEALPF 92

Query: 92  DLLKKKLMSRLHTMGIQVAKTCEKL*PW 9
           DLLKKKL+SRL TMGI++ KT E+   W
Sbjct: 93  DLLKKKLLSRLKTMGIRIIKTYEEEWSW 120


>ref|XP_002514136.1| Lycopene epsilon cyclase, chloroplast precursor, putative [Ricinus
           communis] gi|223546592|gb|EEF48090.1| Lycopene epsilon
           cyclase, chloroplast precursor, putative [Ricinus
           communis]
          Length = 508

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/84 (60%), Positives = 58/84 (69%), Gaps = 12/84 (14%)
 Frame = -3

Query: 236 VENNLYDPSLMGIMDYRDYTNEKVPGMETEYPMFLY------------ETGLASKDAISF 93
           VENN YDPSLM  MDYRDY  +KVP +E EYP FLY            ET LASK A+ F
Sbjct: 267 VENNPYDPSLMVFMDYRDYIKQKVPHLEAEYPTFLYAMPMSSTRVFFEETCLASKGAMPF 326

Query: 92  DLLKKKLMSRLHTMGIQVAKTCEK 21
           DLLK+KLMSRL TMGI++ KT E+
Sbjct: 327 DLLKRKLMSRLETMGIRILKTYEE 350


>gb|AFP28798.1| lycopene epsilon-cyclase 1 [Vitis vinifera]
          Length = 530

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/84 (58%), Positives = 58/84 (69%), Gaps = 12/84 (14%)
 Frame = -3

Query: 236 VENNLYDPSLMGIMDYRDYTNEKVPGMETEYPMFLY------------ETGLASKDAISF 93
           VENN YDPSLM  MDYRD+  +KV  +E +YP FLY            ET LASKDA+ F
Sbjct: 273 VENNPYDPSLMVFMDYRDHIKQKVQCLEVQYPTFLYVMPMSPTRVFFEETCLASKDAMPF 332

Query: 92  DLLKKKLMSRLHTMGIQVAKTCEK 21
           DLLKKKLMSRL TMGI++ +T E+
Sbjct: 333 DLLKKKLMSRLETMGIRIIRTYEE 356


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