BLASTX nr result

ID: Cnidium21_contig00027572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027572
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532971.1| mitochondrial ribosomal protein L24, putativ...   150   2e-34
ref|NP_001238714.1| uncharacterized protein LOC100305917 [Glycin...   148   1e-33
gb|AFK48729.1| unknown [Medicago truncatula]                          148   1e-33
ref|XP_003632319.1| PREDICTED: 39S ribosomal protein L24, mitoch...   147   2e-33
ref|XP_002305718.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33

>ref|XP_002532971.1| mitochondrial ribosomal protein L24, putative [Ricinus communis]
           gi|223527249|gb|EEF29408.1| mitochondrial ribosomal
           protein L24, putative [Ricinus communis]
          Length = 159

 Score =  150 bits (380), Expect = 2e-34
 Identities = 72/85 (84%), Positives = 78/85 (91%)
 Frame = +1

Query: 283 HVSNVQVLDPVTEKPCKIGIRYLEDGTKVRVSRGIGASESIIPRPEILKIRTTPRPTMVG 462
           H SNVQVLDPVT KPCK+G RYLEDGTKVRVSRGIGAS SIIPRPEILKIRTTPRPT  G
Sbjct: 75  HASNVQVLDPVTGKPCKVGYRYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTPRPTEAG 134

Query: 463 PKDTPMNLVLERTFDSKVGKGMPNL 537
           PKDTP++LVLERT+D+K GKGMP+L
Sbjct: 135 PKDTPIDLVLERTYDAKTGKGMPDL 159



 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 38/45 (84%), Positives = 45/45 (100%)
 Frame = +3

Query: 6   HWKILRGDNVMVMRGKDKGETGVVKRVIRSQNRVIIEGKNLVKKH 140
           HWK+LRGDNV+++RGKDKGETG++KRVIRSQNRVI+EGKNLVKKH
Sbjct: 12  HWKVLRGDNVIIIRGKDKGETGIIKRVIRSQNRVIVEGKNLVKKH 56


>ref|NP_001238714.1| uncharacterized protein LOC100305917 [Glycine max]
           gi|255626969|gb|ACU13829.1| unknown [Glycine max]
          Length = 159

 Score =  148 bits (374), Expect = 1e-33
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = +1

Query: 283 HVSNVQVLDPVTEKPCKIGIRYLEDGTKVRVSRGIGASESIIPRPEILKIRTTPRPTMVG 462
           H SNVQV+DPVT KPCK+G +YLEDG+KVRVSRGIGAS SIIPRPEILKIRTTPRPT++G
Sbjct: 75  HASNVQVIDPVTRKPCKVGTKYLEDGSKVRVSRGIGASGSIIPRPEILKIRTTPRPTVLG 134

Query: 463 PKDTPMNLVLERTFDSKVGKGMPNL 537
           PKDTPM+LVLE+T+D+K G+GMP L
Sbjct: 135 PKDTPMDLVLEKTYDAKTGRGMPEL 159



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = +3

Query: 6   HWKILRGDNVMVMRGKDKGETGVVKRVIRSQNRVIIEGKNLVKKH 140
           HWK+LRGDNVM++RGKDKGETG +KRVIR+QNRVI+EGKNLVKKH
Sbjct: 12  HWKVLRGDNVMIIRGKDKGETGNIKRVIRTQNRVIVEGKNLVKKH 56


>gb|AFK48729.1| unknown [Medicago truncatula]
          Length = 159

 Score =  148 bits (373), Expect = 1e-33
 Identities = 69/85 (81%), Positives = 77/85 (90%)
 Frame = +1

Query: 283 HVSNVQVLDPVTEKPCKIGIRYLEDGTKVRVSRGIGASESIIPRPEILKIRTTPRPTMVG 462
           H SNVQVLDPVT KPCK+G +YLEDGTKVRVSRGIGAS SIIPRPEILKIRTTPRP++ G
Sbjct: 75  HASNVQVLDPVTGKPCKVGTKYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTPRPSVAG 134

Query: 463 PKDTPMNLVLERTFDSKVGKGMPNL 537
           PKDTPM +VLE+T+DSK G+GMP L
Sbjct: 135 PKDTPMEIVLEKTYDSKTGRGMPEL 159



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 39/45 (86%), Positives = 45/45 (100%)
 Frame = +3

Query: 6   HWKILRGDNVMVMRGKDKGETGVVKRVIRSQNRVIIEGKNLVKKH 140
           HWK+LRGDNVM++RGKDKGETGV+KRV+RSQNRVI+EGKNLVKKH
Sbjct: 12  HWKVLRGDNVMIIRGKDKGETGVIKRVVRSQNRVIVEGKNLVKKH 56


>ref|XP_003632319.1| PREDICTED: 39S ribosomal protein L24, mitochondrial-like [Vitis
           vinifera] gi|296085225|emb|CBI28720.3| unnamed protein
           product [Vitis vinifera]
          Length = 159

 Score =  147 bits (371), Expect = 2e-33
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +1

Query: 283 HVSNVQVLDPVTEKPCKIGIRYLEDGTKVRVSRGIGASESIIPRPEILKIRTTPRPTMVG 462
           H SNVQ+LDP T+KP KIGIRYLEDGTKVRVSRG GAS SIIPRPEILKIRTTPRPT+ G
Sbjct: 75  HASNVQILDPATQKPVKIGIRYLEDGTKVRVSRGQGASGSIIPRPEILKIRTTPRPTVAG 134

Query: 463 PKDTPMNLVLERTFDSKVGKGMPNL 537
           PKDTPM+LVLE+T+D+K GKGMP L
Sbjct: 135 PKDTPMDLVLEKTYDAKTGKGMPGL 159



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 39/45 (86%), Positives = 45/45 (100%)
 Frame = +3

Query: 6   HWKILRGDNVMVMRGKDKGETGVVKRVIRSQNRVIIEGKNLVKKH 140
           +WKI+RGDNVM++RGKDKGETGV+KRVIRSQNRVI+EGKNLVKKH
Sbjct: 12  NWKIVRGDNVMIIRGKDKGETGVIKRVIRSQNRVIVEGKNLVKKH 56


>ref|XP_002305718.1| predicted protein [Populus trichocarpa] gi|222848682|gb|EEE86229.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  146 bits (369), Expect = 4e-33
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = +1

Query: 283 HVSNVQVLDPVTEKPCKIGIRYLEDGTKVRVSRGIGASESIIPRPEILKIRTTPRPTMVG 462
           H SNVQV+DPVT +PCK+GIRYLEDGTKVRVSRG G+S SIIPRPEILKIRTTPRPT+ G
Sbjct: 75  HASNVQVVDPVTGRPCKVGIRYLEDGTKVRVSRGEGSSGSIIPRPEILKIRTTPRPTVAG 134

Query: 463 PKDTPMNLVLERTFDSKVGKGMPNL 537
           PKDTPM+LVL++T+D+K GKGMP+L
Sbjct: 135 PKDTPMDLVLKKTYDAKTGKGMPDL 159



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 39/45 (86%), Positives = 45/45 (100%)
 Frame = +3

Query: 6   HWKILRGDNVMVMRGKDKGETGVVKRVIRSQNRVIIEGKNLVKKH 140
           HWK+LRGDNVM++RGKD+GETGVVKRV+RSQNRVI+EGKNLVKKH
Sbjct: 12  HWKVLRGDNVMIIRGKDRGETGVVKRVVRSQNRVIVEGKNLVKKH 56


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