BLASTX nr result

ID: Cnidium21_contig00027562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027562
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP03878.1| Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana...    60   2e-07
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...    58   7e-07
ref|XP_002307282.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...    56   3e-06
ref|XP_002310119.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>gb|AAP03878.1| Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana tabacum]
          Length = 550

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +3

Query: 3   NLTRLKLRGCGELIDVGMTDFAMHANYLNKSSCGSCMFDAERMN 134
           NLTRLKLRGC ++ DVGM+ FA +   L K SCGSCMF A+ MN
Sbjct: 151 NLTRLKLRGCRDVTDVGMSAFAKNCKSLKKFSCGSCMFGAKGMN 194


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/46 (63%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   NLTRLKLRGCGELIDVGMTDFAMHANYLNKSSCGSCMFDAERMNPV 140
           NLTRLKLR C EL DVGM  FA +   L K SCGSC F A+ MN V
Sbjct: 143 NLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGSCTFGAKGMNAV 188


>ref|XP_002307282.1| predicted protein [Populus trichocarpa] gi|222856731|gb|EEE94278.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = +3

Query: 3   NLTRLKLRGCGELIDVGMTDFAMHANYLNKSSCGSCMFDAERMN 134
           NLTRLKLRGC EL ++GM +FA +   L K SCGSC F  E +N
Sbjct: 132 NLTRLKLRGCRELTELGMANFAKNCKNLTKFSCGSCNFGVEGIN 175


>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   NLTRLKLRGCGELIDVGMTDFAMHANYLNKSSCGSCMFDAERMNPV 140
           NLTRLKLR C EL D GM  FA +   L K SCGSC F A  MN +
Sbjct: 143 NLTRLKLRSCRELTDAGMAAFAKNCKALKKLSCGSCTFGARGMNAI 188


>ref|XP_002310119.1| predicted protein [Populus trichocarpa] gi|222853022|gb|EEE90569.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = +3

Query: 3   NLTRLKLRGCGELIDVGMTDFAMHANYLNKSSCGSCMFDAERMNPVEIYSV 155
           +LTRLKLRGC E+ ++GM DFA +   L K SCGSC F A+ +N +  Y +
Sbjct: 128 SLTRLKLRGCREVTELGMADFAKNCKNLTKFSCGSCNFGAKGINMLLKYCI 178


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