BLASTX nr result
ID: Cnidium21_contig00027531
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00027531 (752 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|35549... 66 9e-09 ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|2... 64 3e-08 ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|2... 64 3e-08 ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2... 64 3e-08 ref|XP_003622776.1| F-box/kelch-repeat protein [Medicago truncat... 62 1e-07 >ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|355498102|gb|AES79305.1| F-box protein [Medicago truncatula] Length = 543 Score = 65.9 bits (159), Expect = 9e-09 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 9/108 (8%) Frame = +2 Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRS---PKGVISHESRRA 625 LP +++ ++LS L VK+++ RCVC W+IL+S+S+FV LHL RS P+ ++ ESR Sbjct: 22 LPLDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNPRLAVTQESREC 81 Query: 626 -----INVFKLGELDNKSNYHDMINHDPLERLNLGLC-WLEGSVNGLI 751 ++ L L + + +DP LN C + GS NGL+ Sbjct: 82 SMDVIVSPTSLSHLLENPSKPTTLTNDPYYSLNDKDCRSVAGSCNGLL 129 >ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|222873401|gb|EEF10532.1| predicted protein [Populus trichocarpa] Length = 255 Score = 64.3 bits (155), Expect = 3e-08 Identities = 27/50 (54%), Positives = 38/50 (76%) Frame = +2 Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGVI 604 LP+ ++ DILSRL +KTI++CRCVCK W +S+S+F LHL RSP ++ Sbjct: 28 LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLL 77 >ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|222871560|gb|EEF08691.1| predicted protein [Populus trichocarpa] Length = 297 Score = 64.3 bits (155), Expect = 3e-08 Identities = 27/50 (54%), Positives = 38/50 (76%) Frame = +2 Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGVI 604 LP+ ++ DILSRL +KTI++CRCVCK W +S+S+F LHL RSP ++ Sbjct: 28 LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLL 77 >ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1| predicted protein [Populus trichocarpa] Length = 452 Score = 64.3 bits (155), Expect = 3e-08 Identities = 27/50 (54%), Positives = 38/50 (76%) Frame = +2 Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGVI 604 LP+ ++ DILSRL +KTI++CRCVCK W +S+S+F LHL RSP ++ Sbjct: 28 LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLL 77 >ref|XP_003622776.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355497791|gb|AES78994.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 401 Score = 62.0 bits (149), Expect = 1e-07 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 12/111 (10%) Frame = +2 Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGV---------IS 607 LP E++ ++LS L VK+++ +C CK W L+S+ +F+ LHL RS K ++ Sbjct: 22 LPDELITEVLSYLPVKSLMQLKCCCKSWNTLVSKPFFIRLHLQRSSKNPHFTLFNIPDMN 81 Query: 608 HESRRA--INVFKLGELDNKSNYHDMINHDPLERL-NLGLCWLEGSVNGLI 751 + A I+ +L E + + +DP RL N CW+ GS NGL+ Sbjct: 82 KDDTDAVLISFTRLIESSLCLSKSITLTNDPYYRLENKSCCWIVGSCNGLL 132