BLASTX nr result

ID: Cnidium21_contig00027531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027531
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|35549...    66   9e-09
ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_003622776.1| F-box/kelch-repeat protein [Medicago truncat...    62   1e-07

>ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|355498102|gb|AES79305.1|
           F-box protein [Medicago truncatula]
          Length = 543

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
 Frame = +2

Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRS---PKGVISHESRRA 625
           LP +++ ++LS L VK+++  RCVC  W+IL+S+S+FV LHL RS   P+  ++ ESR  
Sbjct: 22  LPLDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNPRLAVTQESREC 81

Query: 626 -----INVFKLGELDNKSNYHDMINHDPLERLNLGLC-WLEGSVNGLI 751
                ++   L  L    +    + +DP   LN   C  + GS NGL+
Sbjct: 82  SMDVIVSPTSLSHLLENPSKPTTLTNDPYYSLNDKDCRSVAGSCNGLL 129


>ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|222873401|gb|EEF10532.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = +2

Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGVI 604
           LP+ ++ DILSRL +KTI++CRCVCK W   +S+S+F  LHL RSP  ++
Sbjct: 28  LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLL 77


>ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|222871560|gb|EEF08691.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = +2

Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGVI 604
           LP+ ++ DILSRL +KTI++CRCVCK W   +S+S+F  LHL RSP  ++
Sbjct: 28  LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLL 77


>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = +2

Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGVI 604
           LP+ ++ DILSRL +KTI++CRCVCK W   +S+S+F  LHL RSP  ++
Sbjct: 28  LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLL 77


>ref|XP_003622776.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355497791|gb|AES78994.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 401

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
 Frame = +2

Query: 455 LPAEIMADILSRLAVKTIVHCRCVCKKWRILLSESYFVNLHLSRSPKGV---------IS 607
           LP E++ ++LS L VK+++  +C CK W  L+S+ +F+ LHL RS K           ++
Sbjct: 22  LPDELITEVLSYLPVKSLMQLKCCCKSWNTLVSKPFFIRLHLQRSSKNPHFTLFNIPDMN 81

Query: 608 HESRRA--INVFKLGELDNKSNYHDMINHDPLERL-NLGLCWLEGSVNGLI 751
            +   A  I+  +L E     +    + +DP  RL N   CW+ GS NGL+
Sbjct: 82  KDDTDAVLISFTRLIESSLCLSKSITLTNDPYYRLENKSCCWIVGSCNGLL 132


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