BLASTX nr result

ID: Cnidium21_contig00027530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027530
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313036.1| predicted protein [Populus trichocarpa] gi|2...   192   5e-47
ref|XP_002283855.1| PREDICTED: glucose-1-phosphate adenylyltrans...   187   2e-45
ref|XP_002306116.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
gb|ABC26923.1| ADPglucose pyrophosphorylase large subunit [Solan...   179   5e-43
gb|AAD56405.1|AF184345_1 ADP-glucose pyrophosphorylase large sub...   175   7e-42

>ref|XP_002313036.1| predicted protein [Populus trichocarpa] gi|222849444|gb|EEE86991.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  192 bits (487), Expect = 5e-47
 Identities = 98/146 (67%), Positives = 112/146 (76%), Gaps = 7/146 (4%)
 Frame = -2

Query: 419 MDSCSAALNV-------SKSFVGKGDNRFFGERIRGSLNRNNWSNCIEKSLKFGKRVRKI 261
           MDSC A L         SK     GD  F+GERIRGS N + W N + KSLK  K V K 
Sbjct: 1   MDSCCATLKANTHVAKASKGGFNNGDKEFWGERIRGSFNNSVWVNQLAKSLKVDKSVNKF 60

Query: 260 KPGVSFSVLTSNNGVETMSIKVPRLERKTANPKNVAAIILGGGAGTQLFPLTRRSATPAV 81
           KPGV+FSVLTS+NG ET++++ PR ER+ A+PKNVA+IILGGGAGTQLFPLTRR+ATPAV
Sbjct: 61  KPGVAFSVLTSSNGRETVTLQPPRFERRKADPKNVASIILGGGAGTQLFPLTRRAATPAV 120

Query: 80  PVGGCYRLIDIPMSNCINSCINKIFV 3
           P+GGCYRLIDIPMSNCINS INKIFV
Sbjct: 121 PLGGCYRLIDIPMSNCINSGINKIFV 146


>ref|XP_002283855.1| PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1
           [Vitis vinifera]
          Length = 527

 Score =  187 bits (474), Expect = 2e-45
 Identities = 95/146 (65%), Positives = 110/146 (75%), Gaps = 7/146 (4%)
 Frame = -2

Query: 419 MDSCSAALNV-------SKSFVGKGDNRFFGERIRGSLNRNNWSNCIEKSLKFGKRVRKI 261
           MDSC             S+  +  GDN F+GERIRGSLN + W + + K LK  KR RKI
Sbjct: 1   MDSCCVTFKAKAHLAKASRGGLSNGDNEFWGERIRGSLNNSGWVSQLAKGLKTEKRPRKI 60

Query: 260 KPGVSFSVLTSNNGVETMSIKVPRLERKTANPKNVAAIILGGGAGTQLFPLTRRSATPAV 81
           KPGV+ SV+TSNNG ET++I+ P  ER+ A+PKNVA+IILGGGAGTQLFPLT R ATPAV
Sbjct: 61  KPGVACSVITSNNGKETVTIQAPIFERRRADPKNVASIILGGGAGTQLFPLTIRQATPAV 120

Query: 80  PVGGCYRLIDIPMSNCINSCINKIFV 3
           PVGGCYRLIDIPMSNCINS INKIF+
Sbjct: 121 PVGGCYRLIDIPMSNCINSNINKIFI 146


>ref|XP_002306116.1| predicted protein [Populus trichocarpa] gi|222849080|gb|EEE86627.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score =  184 bits (467), Expect = 1e-44
 Identities = 99/146 (67%), Positives = 112/146 (76%), Gaps = 7/146 (4%)
 Frame = -2

Query: 419 MDSCSAALN----VSKSFVG---KGDNRFFGERIRGSLNRNNWSNCIEKSLKFGKRVRKI 261
           MDSC  AL     V+K+  G    GD  F+GERIRGS N N W N   KSLK  K V K 
Sbjct: 1   MDSCYVALRANTPVAKASKGGFINGDTEFWGERIRGSFN-NIWVNQFAKSLKVDKSVNKF 59

Query: 260 KPGVSFSVLTSNNGVETMSIKVPRLERKTANPKNVAAIILGGGAGTQLFPLTRRSATPAV 81
            PGV+F+VLTSNNG ET++++ PR  R+ A+PKNVA+IILGGGAGTQLFPLTRR+ATPAV
Sbjct: 60  TPGVAFAVLTSNNGKETVTLQPPRFGRRRADPKNVASIILGGGAGTQLFPLTRRAATPAV 119

Query: 80  PVGGCYRLIDIPMSNCINSCINKIFV 3
           PVGGCYRLIDIPMSNCINS INKIFV
Sbjct: 120 PVGGCYRLIDIPMSNCINSGINKIFV 145


>gb|ABC26923.1| ADPglucose pyrophosphorylase large subunit [Solanum habrochaites]
          Length = 527

 Score =  179 bits (453), Expect = 5e-43
 Identities = 89/146 (60%), Positives = 110/146 (75%), Gaps = 7/146 (4%)
 Frame = -2

Query: 419 MDSCSAALN-------VSKSFVGKGDNRFFGERIRGSLNRNNWSNCIEKSLKFGKRVRKI 261
           MD+C AA+        VS      G+   FGE++RGSLN N   N + KSLK  K+ +KI
Sbjct: 1   MDTCCAAMKSTVHLGRVSTGSFNNGEKEIFGEKMRGSLNNNLRINQLSKSLKLEKKEKKI 60

Query: 260 KPGVSFSVLTSNNGVETMSIKVPRLERKTANPKNVAAIILGGGAGTQLFPLTRRSATPAV 81
           KPGV+++V+T+ N  ET+ + +PRLER+ ANPK+VAA+ILGGG GT+LFPLT R+ATPAV
Sbjct: 61  KPGVAYAVITTENDTETVFVDMPRLERRRANPKDVAAVILGGGEGTKLFPLTSRTATPAV 120

Query: 80  PVGGCYRLIDIPMSNCINSCINKIFV 3
           PVGGCYRLIDIPMSNCINS INKIFV
Sbjct: 121 PVGGCYRLIDIPMSNCINSAINKIFV 146


>gb|AAD56405.1|AF184345_1 ADP-glucose pyrophosphorylase large subunit [Solanum habrochaites]
          Length = 520

 Score =  175 bits (443), Expect = 7e-42
 Identities = 85/130 (65%), Positives = 103/130 (79%)
 Frame = -2

Query: 392 VSKSFVGKGDNRFFGERIRGSLNRNNWSNCIEKSLKFGKRVRKIKPGVSFSVLTSNNGVE 213
           VS      G+   FGE++RGSLN N   N + KSLK  K+ +KIKPGV++SV+T+ N  E
Sbjct: 10  VSTGGFNNGEKEIFGEKMRGSLNNNLRINQLSKSLKLEKKEKKIKPGVAYSVITTENDTE 69

Query: 212 TMSIKVPRLERKTANPKNVAAIILGGGAGTQLFPLTRRSATPAVPVGGCYRLIDIPMSNC 33
           T+ + +PRLER+ ANPK+VAA+ILGGG GT+LFPLT R+ATPAVPVGGCYRLIDIPMSNC
Sbjct: 70  TVFVDMPRLERRRANPKDVAAVILGGGEGTKLFPLTSRTATPAVPVGGCYRLIDIPMSNC 129

Query: 32  INSCINKIFV 3
           INS INKIFV
Sbjct: 130 INSAINKIFV 139


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