BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027495
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF99351.1| retrotransposon protein, putative, unclassified [...    64   1e-08
gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japoni...    64   1e-08
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    64   1e-08
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...    63   3e-08
dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica G...    62   4e-08

>gb|ABF99351.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1190

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
 Frame = -3

Query: 410 GTKGYRLFDPESKKIQVSRDVIFDESKAWSWVNKNGDTNSSQEAFTVVGI---DEGNDRA 240
           GTKGY++FDP + ++QVSRDVIFDE  +W W  +  ++   Q  F++  +     G  R 
Sbjct: 554 GTKGYKVFDPVTGRVQVSRDVIFDEGASWDWGAEAAESGLEQTEFSIEYVLTQVSGGGRG 613

Query: 239 EDEDASNPGTPVGETRSPQSQKDERVVVTP---VHSTS------------SLDAYDGSTP 105
             E+ S+P +    + +P+  +     + P   +H TS             LDA     P
Sbjct: 614 AQEENSSPSSRRAASTTPEEPRTPSPSLGPRASLHGTSPVFISPPSRGDEHLDADHDDCP 673

Query: 104 PRKFRLLSDV 75
           PR +R L D+
Sbjct: 674 PR-YRPLGDL 682


>gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1182

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
 Frame = -3

Query: 410 GTKGYRLFDPESKKIQVSRDVIFDESKAWSWVNKNGDTNSSQEAFTVVGI---DEGNDRA 240
           GTKGY++FDP + ++QVSRDVIFDE  +W W  +  ++   Q  F++  +     G  R 
Sbjct: 546 GTKGYKVFDPVTGRVQVSRDVIFDEGASWDWGAEAAESGLEQTEFSIEYVLTQVSGGGRG 605

Query: 239 EDEDASNPGTPVGETRSPQSQKDERVVVTP---VHSTS------------SLDAYDGSTP 105
             E+ S+P +    + +P+  +     + P   +H TS             LDA     P
Sbjct: 606 AQEENSSPSSRRAASTTPEEPRTPSPSLGPRASLHGTSPVFISPPSRGDEHLDADHDDCP 665

Query: 104 PRKFRLLSDV 75
           PR +R L D+
Sbjct: 666 PR-YRPLGDL 674


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
 Frame = -3

Query: 407 TKGYRLFDPESKKIQVSRDVIFDESKAWSW-VNKNGDTNSSQEAFTVVGIDEGNDRAEDE 231
           +KGY+L++P S KI VSR+V+FDE  +W+W V+++G          +V I   ++ A+ E
Sbjct: 634 SKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSEDG---------ALVEISSESEVAQSE 684

Query: 230 DASNPGTPVGETRSPQSQKDERVVVTPVHSTSSLDAYDGSTPPRKFRLLSDVY 72
           D   P   +  + +P          +P  S+SS       TPPRKFR L D+Y
Sbjct: 685 D-QQPSVQIPASPTPSHSPS-----SPNLSSSSSSQSSEETPPRKFRSLRDIY 731


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/102 (37%), Positives = 53/102 (51%)
 Frame = -3

Query: 410  GTKGYRLFDPESKKIQVSRDVIFDESKAWSWVNKNGDTNSSQEAFTVVGIDEGNDRAEDE 231
            G+K +RLFDP   +I VSRDVIF+E+  W W    G+ NS++  FTV       D  +  
Sbjct: 755  GSKAHRLFDPRCGRIHVSRDVIFEENVPWQWSVVAGEQNSTE--FTV-----EEDGVDAP 807

Query: 230  DASNPGTPVGETRSPQSQKDERVVVTPVHSTSSLDAYDGSTP 105
             A  P  PV   R+P     +    +PV ++SSL     S+P
Sbjct: 808  PAGAPAYPVPRYRAPSPAVPQSPPASPVGASSSLPTSPQSSP 849


>dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1094

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = -3

Query: 410 GTKGYRLFDPESKKIQVSRDVIFDESKAWSWVNKNGDTNSSQEAFTV--VGIDEGNDRAE 237
           G+K YR++DP S+++ VSRDV+FDE+  W W +        +E FTV       G +R  
Sbjct: 440 GSKAYRMYDPVSRRVYVSRDVVFDEAAMWPWRDPEVTQTGGEEDFTVEFFSTPLGGNRVP 499

Query: 236 DEDASNPGTPVGETR-SPQSQKDERVVVTPVHSTSSLDAYDGSTPPRKFRLLSD 78
           D    + G    ET  SP +  D   V +PV ++SS    +  TPP    + SD
Sbjct: 500 DVVVEHGGARETETAPSPLATPDAAPVWSPV-TSSSPAGVEFCTPPSDASIESD 552