BLASTX nr result

ID: Cnidium21_contig00027494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027494
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   345   1e-92
ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   332   7e-89
ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-a...   322   5e-86
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...   322   9e-86
ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...   321   2e-85

>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score =  345 bits (884), Expect = 1e-92
 Identities = 170/260 (65%), Positives = 205/260 (78%)
 Frame = +1

Query: 10  TSQHANSADTVFRSAVGEDRVVENDERLIFQAALQDLSQPNLEADLPDGLMTVPLLRHQK 189
           ++Q    ++ V+ S  G++     DERL++QAAL+DL+QP +EA+LPDGLM+VPLLRHQK
Sbjct: 146 SAQFPGPSEPVYHSMAGDENAAGTDERLVYQAALEDLNQPKVEANLPDGLMSVPLLRHQK 205

Query: 190 IALAWMFQKETKSAFCSGGILADDQGLGKTISMIAIILKQRSLQSKSKPEDPNQQTTEAL 369
           IALAWM QKET+S  C GGILADDQGLGKTISMIA++  Q+SL++KSK ED     TEAL
Sbjct: 206 IALAWMLQKETRSLHCLGGILADDQGLGKTISMIALVQMQKSLETKSKSEDQRNHKTEAL 265

Query: 370 NVDDDEDNKITVLDDDKQDGESNDLKLLPEASTSRRAFKSLRPQAGTLVVCPASVLRQWA 549
           N+DDD+DN   VLD DKQ  ES D+K  PEA +S +A    RP AGTLVVCPASVLRQWA
Sbjct: 266 NLDDDDDNGTLVLDKDKQTRESADIKSTPEAGSSTKAISRRRPAAGTLVVCPASVLRQWA 325

Query: 550 RELDEKVAEEAPLKVLIYHGSTRTKDPSELAAYDVVLTTYALVANEVPKQPVVDEDEDDM 729
           RELD+KVA+ A L VLIYHG  RT+ P ELA +DVVLTTY++V NEVPKQP+VDEDE D 
Sbjct: 326 RELDDKVADGAKLSVLIYHGGNRTRSPDELAKHDVVLTTYSIVTNEVPKQPLVDEDEADD 385

Query: 730 KNGERHGLSAGFSTNKKQKK 789
           KNGE+HGLS+ FS NKK+KK
Sbjct: 386 KNGEKHGLSSEFSNNKKRKK 405


>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  332 bits (851), Expect = 7e-89
 Identities = 167/264 (63%), Positives = 205/264 (77%), Gaps = 1/264 (0%)
 Frame = +1

Query: 1    STSTSQHANSADTVFRSAVGEDRVVENDERLIFQAALQDLSQPNLEADLPDGLMTVPLLR 180
            S  ++Q+   +++ +R  V E+     DERL++QAALQDL+QP +EA LPDGL+TV LLR
Sbjct: 228  SVPSTQYGGVSESAYRPGVAEEMAANTDERLVYQAALQDLNQPKVEATLPDGLLTVSLLR 287

Query: 181  HQKIALAWMFQKETKSAFCSGGILADDQGLGKTISMIAIILKQRSLQSKSKPEDPNQQTT 360
            HQKIALAWM QKET+S  C GGILADDQGLGKT+SMIA+I  Q+SLQSKSK E+ +  +T
Sbjct: 288  HQKIALAWMHQKETRSLHCLGGILADDQGLGKTVSMIALIQMQKSLQSKSKSEELHNHST 347

Query: 361  EALNVDDDEDNKITV-LDDDKQDGESNDLKLLPEASTSRRAFKSLRPQAGTLVVCPASVL 537
            EALN+DDD+DN      D  KQ  E++D K + E S S   F+  RP AGTLVVCPASVL
Sbjct: 348  EALNLDDDDDNANAAGSDKGKQTEETSDSKPISEVSASLPEFRRRRPAAGTLVVCPASVL 407

Query: 538  RQWARELDEKVAEEAPLKVLIYHGSTRTKDPSELAAYDVVLTTYALVANEVPKQPVVDED 717
            RQWARELDEKV+EEA L V +YHG +RTKDP ELA YDVVLTTY++V NEVPKQP+VD+D
Sbjct: 408  RQWARELDEKVSEEAKLSVCLYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPKQPLVDDD 467

Query: 718  EDDMKNGERHGLSAGFSTNKKQKK 789
            E D +NGE++GLS+ FS NKK+KK
Sbjct: 468  EGDERNGEKYGLSSEFSVNKKRKK 491


>ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Glycine max]
          Length = 975

 Score =  322 bits (826), Expect = 5e-86
 Identities = 165/258 (63%), Positives = 203/258 (78%)
 Frame = +1

Query: 16  QHANSADTVFRSAVGEDRVVENDERLIFQAALQDLSQPNLEADLPDGLMTVPLLRHQKIA 195
           Q A S+++ +R+  G++R  E+DERLI++AALQD+SQP  E DLP G+++V LLRHQKIA
Sbjct: 191 QFATSSESAYRAGAGDERAAESDERLIYEAALQDISQPKTEYDLPAGVLSVSLLRHQKIA 250

Query: 196 LAWMFQKETKSAFCSGGILADDQGLGKTISMIAIILKQRSLQSKSKPEDPNQQTTEALNV 375
           LAWM QKETKS  C GGILADDQGLGKTISMI++IL QRSLQSKSK +D     TEALN+
Sbjct: 251 LAWMLQKETKSLHCLGGILADDQGLGKTISMISLILAQRSLQSKSKIDDTCSHKTEALNL 310

Query: 376 DDDEDNKITVLDDDKQDGESNDLKLLPEASTSRRAFKSLRPQAGTLVVCPASVLRQWARE 555
           DDD+DN    ++  K   ES+D+K   E S+S +A    RP AGTLVVCPASVLRQWARE
Sbjct: 311 DDDDDNGSVDVEKHKNSEESDDIKPSREPSSSTQAPGRKRPAAGTLVVCPASVLRQWARE 370

Query: 556 LDEKVAEEAPLKVLIYHGSTRTKDPSELAAYDVVLTTYALVANEVPKQPVVDEDEDDMKN 735
           LDEKV +E  L VL+YHG +RTKDP ELA +DVVLTTY++V NEVPKQP+V++D+ D KN
Sbjct: 371 LDEKVGDE-KLSVLVYHGGSRTKDPVELAKFDVVLTTYSIVTNEVPKQPLVEDDDIDGKN 429

Query: 736 GERHGLSAGFSTNKKQKK 789
           GER GLS+ FS +KK+KK
Sbjct: 430 GERFGLSSEFSVSKKRKK 447


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 993

 Score =  322 bits (824), Expect = 9e-86
 Identities = 163/252 (64%), Positives = 198/252 (78%)
 Frame = +1

Query: 34  DTVFRSAVGEDRVVENDERLIFQAALQDLSQPNLEADLPDGLMTVPLLRHQKIALAWMFQ 213
           D  F    GE+ V  +DERLI+QAAL+DL+QP +EA LPDGL++VPLLRHQKIALAWM Q
Sbjct: 217 DPAFHPMAGEEGVAGSDERLIYQAALEDLNQPKVEATLPDGLLSVPLLRHQKIALAWMLQ 276

Query: 214 KETKSAFCSGGILADDQGLGKTISMIAIILKQRSLQSKSKPEDPNQQTTEALNVDDDEDN 393
           KET+S  C GGILADDQGLGKT+SMIA+I  Q+ LQ KSK ED   + +EALN+DDD+++
Sbjct: 277 KETRSLHCLGGILADDQGLGKTVSMIALIQMQKFLQLKSKSEDQANKKSEALNLDDDDES 336

Query: 394 KITVLDDDKQDGESNDLKLLPEASTSRRAFKSLRPQAGTLVVCPASVLRQWARELDEKVA 573
               L++ KQ GE +D   +PEAS S R FK  R  AGTLVVCPAS+LRQWA ELD+KVA
Sbjct: 337 GRPGLNEVKQVGEYDDTTSVPEASNSTRVFKRKRLAAGTLVVCPASILRQWAGELDDKVA 396

Query: 574 EEAPLKVLIYHGSTRTKDPSELAAYDVVLTTYALVANEVPKQPVVDEDEDDMKNGERHGL 753
           +EA L  LIYHG +RTKDP+ELA YDVVLTTY+++ NEVPKQP+V+EDE D K+GE+ GL
Sbjct: 397 DEAKLTCLIYHGGSRTKDPAELAKYDVVLTTYSIITNEVPKQPLVNEDEADEKDGEKCGL 456

Query: 754 SAGFSTNKKQKK 789
           S+ FS NKK KK
Sbjct: 457 SSEFSINKKMKK 468


>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score =  321 bits (822), Expect = 2e-85
 Identities = 165/258 (63%), Positives = 202/258 (78%)
 Frame = +1

Query: 16  QHANSADTVFRSAVGEDRVVENDERLIFQAALQDLSQPNLEADLPDGLMTVPLLRHQKIA 195
           Q A S+++ +RS  G++R  E+DERLI++AALQD+SQP  E DLP G+++V LLRHQKIA
Sbjct: 224 QFATSSESAYRSGAGDERAAESDERLIYEAALQDISQPKTEYDLPAGVLSVSLLRHQKIA 283

Query: 196 LAWMFQKETKSAFCSGGILADDQGLGKTISMIAIILKQRSLQSKSKPEDPNQQTTEALNV 375
           LAWM QKETKS  C GGILADDQGLGKTISMI++IL QR+LQSKSK +D     TEALN+
Sbjct: 284 LAWMLQKETKSLHCLGGILADDQGLGKTISMISLILAQRTLQSKSKIDDTCSHKTEALNL 343

Query: 376 DDDEDNKITVLDDDKQDGESNDLKLLPEASTSRRAFKSLRPQAGTLVVCPASVLRQWARE 555
           DDD+DN    ++  K   ES+D+K   E S+S +A    RP AGTLVVCPASVLRQWARE
Sbjct: 344 DDDDDNGSVDVEKHKNSEESDDIKPSREPSSSTQAPGRKRPAAGTLVVCPASVLRQWARE 403

Query: 556 LDEKVAEEAPLKVLIYHGSTRTKDPSELAAYDVVLTTYALVANEVPKQPVVDEDEDDMKN 735
           LDEKV +E  L VL+YHG +RTKDP ELA +DVVLTTY++V NEVPKQP+V+ED+ D K 
Sbjct: 404 LDEKVGDE-KLSVLVYHGGSRTKDPVELAKFDVVLTTYSIVTNEVPKQPLVEEDDIDEKM 462

Query: 736 GERHGLSAGFSTNKKQKK 789
           GER GLS+ FS +KK+KK
Sbjct: 463 GERFGLSSEFSVSKKRKK 480


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