BLASTX nr result

ID: Cnidium21_contig00027466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027466
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...   112   9e-23
emb|CBI40164.3| unnamed protein product [Vitis vinifera]              106   6e-21
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   105   8e-21
gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]   100   4e-19
emb|CBI28933.3| unnamed protein product [Vitis vinifera]               99   1e-18

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score =  112 bits (280), Expect = 9e-23
 Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
 Frame = +3

Query: 117 LNDLPDETSTEILLRLPVKDLIRSTSVNKTWYSLINNPSFISSQIRKAISTCHDNTLLII 296
           L+ +P E   +I LRLPVK L+R   + KTWYSLI+N +FIS+  R  I + ++N L++ 
Sbjct: 2   LDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILR 61

Query: 297 PPITSHQNYCSLISTDTSSLIEKF---DIPFHTKTSSLKLIAEIHGMLLLTDLHTEFSSR 467
               S++     +  D   +  ++   D P  +     +++   +G++ LTD H+    R
Sbjct: 62  HYSRSNKKERFALHFDDDDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDNHSHILKR 121

Query: 468 ELFLWNPYVNRHRLLVSTCFKKLLDNRDGTYYFVGMGFDKLMNDYKIVRIVYVKDDKRKL 647
            + LWNP +     L        + N       +G GFD   NDYK++RIVY   +   L
Sbjct: 122 -IVLWNPSIGLSVTLPLQRISYKVSN-----VVLGFGFDSRTNDYKVIRIVYYSTNDDSL 175

Query: 648 LGEVAPKVEIFSLRKNTWRKIKNPGVP---MIVHEDGTYVNGCYYWL 779
           +  V P+VEIF L + TWR   +  VP   +  +     + G  +W+
Sbjct: 176 M--VPPEVEIFELSRGTWRINNSASVPAYDVSKYSSQIVLEGAIHWV 220


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  106 bits (264), Expect = 6e-21
 Identities = 69/221 (31%), Positives = 118/221 (53%), Gaps = 6/221 (2%)
 Frame = +3

Query: 135 ETSTEILLRLPVKDLIRSTSVNKTWYSLINNPSFISSQIRKAISTCHDNTLLIIPPITSH 314
           E   +I LRLPVK ++R   V K+W +L ++P FIS  +R+A S   +  LL     +S 
Sbjct: 23  ENLIDIHLRLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQA-SANSNGRLLFKHLSSSE 81

Query: 315 QNYCSLISTDTSSLIEKFDIPFHTKTSSLKLIAEIHGMLLLTDLHTE--FSSRELFLWNP 488
           Q   SL S    + + + ++P  +KT   +++   +G++ LT+ + +  + S  LFLWNP
Sbjct: 82  QEIYSLRSNIAFAEVRRLEVPVPSKTDYYQIVGSSNGLICLTESNFKGSYLSLNLFLWNP 141

Query: 489 YVNRHRLLVSTCFKKLLDNRDGTYYFVGMG--FDKLMNDYKIVRIVYVKDDKRKLLGEVA 662
            +   + L     K  ++N       VG+G  F  ++NDYK+VRIVY   +K        
Sbjct: 142 AIREFQTLP----KYHINNFTSPLMVVGLGFAFHPVINDYKVVRIVYFMRNK-------T 190

Query: 663 PKVEIFSLRKNTWRKIKNPGVPMIVHED--GTYVNGCYYWL 779
            + +++SLR  +WRK+ +  +   +H +   T++NG  +WL
Sbjct: 191 SEADVYSLRTGSWRKV-DANICCYIHSNVSRTFINGALHWL 230


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  105 bits (263), Expect = 8e-21
 Identities = 68/231 (29%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
 Frame = +3

Query: 117 LNDLPDETSTEILLRLPVKDLIRSTSVNKTWYSLINNPSFISSQIRKAISTCHDNTLLII 296
           ++ LP E   EIL RLP K+L+   SV+K W +LI+ P+F+   ++ ++ T   + L II
Sbjct: 1   MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDT--SSNLYII 58

Query: 297 PPITSHQNYC----SLISTDTSSLIEKFDIPFHTKTSSLKLIAEIHGMLLLTDLHTEFSS 464
              TSH +Y     +L+  D  +L ++ + P       +K++  ++G+L ++++  + + 
Sbjct: 59  LRTTSHVHYMDFEQNLVLNDCVTL-KELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIA- 116

Query: 465 RELFLWNPYVNRHRLL--VSTCFKKLLDNRDGTYYFVGMGFDKLMNDYKIVRIV-YVKDD 635
               +WNP   +HR++  +    K+    +  + Y  G G+D + +DYK+VRI  +    
Sbjct: 117 ----VWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGG 172

Query: 636 KRKLLGEVAPKVEIFSLRKNTWRKIKNPGVPMIVH---EDGTYVNGCYYWL 779
           KR    E    V+++SLRK +WR+I +  +P  VH    +G + NG  +W+
Sbjct: 173 KRSFESE----VKVYSLRKQSWRRIGD--MPYCVHYPGANGVFANGALHWV 217


>gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]
          Length = 386

 Score =  100 bits (249), Expect = 4e-19
 Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
 Frame = +3

Query: 126 LPDETSTEILLRLPVKDLIRSTSVNKTWYSLINNPSFISSQIR-KAISTCHDNTLLIIPP 302
           LPDE  TEILL+LPVK L +   V+K+W  LI++P+F+ + I+  A    + +  LI   
Sbjct: 12  LPDELITEILLKLPVKSLSKFMCVSKSWLQLISSPTFVKNHIKLTADDKGYIHHRLIFRN 71

Query: 303 ITSHQNYCSL--ISTDTSSLIEKF--DIPFHTKTSSLKLIAEIHGMLLLTDLHTEFSSRE 470
           I  +  +CSL  + T      E F  D P    T S  ++  ++G++ +         +E
Sbjct: 72  IDGNFKFCSLPPLFTKQQHTEELFHIDSPIERSTLSTHIVGSVNGLICVV-----HGQKE 126

Query: 471 LFLWNPYVNRHRLLVSTCFKKLLDNRDGTYYFVGMGFDKLMNDYKIVRIVYVKDDKRKLL 650
            ++WNP + + + L      K   N   +    G G+D+  +DYK+V I Y  +      
Sbjct: 127 AYIWNPTITKSKEL-----PKFTSNMCSSSIKYGFGYDESRDDYKVVFIHYPYNHSSS-- 179

Query: 651 GEVAPKVEIFSLRKNTWRKIKNPGVPMIVHEDGTYVNGCYYW 776
             +   V I+SLR N+W   ++     +V+  G +VNG  YW
Sbjct: 180 SNMTTVVHIYSLRNNSWTTFRDQLQCFLVNHYGRFVNGKLYW 221


>emb|CBI28933.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 67/238 (28%), Positives = 125/238 (52%), Gaps = 8/238 (3%)
 Frame = +3

Query: 90  KNIAISTTSLNDLPDETSTEILLRLPVKDLIRSTSVNKTWYSLINNPSFISSQIRKAIST 269
           K +  ++ S N +  E   ++LLRLPVK +IR   V ++W +L N+P FI+  +R+AI+ 
Sbjct: 9   KEMLDNSMSGNFILSENLVDVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMNLRRAIT- 67

Query: 270 CHDNTLLIIPPITSHQNYCSLISTDTS-SLIEKFDIPFHTKTSSLKLIAEIHGMLLLTDL 446
            H+N  +++  ++S +     +  D   +   +  +P  +KT    ++   +G++ LT+ 
Sbjct: 68  -HNNCCMLLKYLSSSEEEVYSLRCDKDFAEFRRLQVPVPSKTDYYHIVGSSNGLICLTES 126

Query: 447 HTE--FSSRELFLWNPYVNRHRLLVSTCFKKLLDNRDGTYYFV---GMGFDKLMNDYKIV 611
           + +  + + + FLWNP V      +    K L++N   + + V   G  F   ++DYK+V
Sbjct: 127 NNKGSYVTVDTFLWNPSVTAQWKPLP---KYLINNMMTSPFMVVGLGFAFHPQIDDYKVV 183

Query: 612 RIVYVKDDKRKLLGEVAPKVEIFSLRKNTWRKIKNPGVPMIVHE--DGTYVNGCYYWL 779
           RIVY    K         +V ++SL+++ W+ I +  V   +H+    T+VNG  +WL
Sbjct: 184 RIVYFLKSK-------TYEVHVYSLKQDAWKNI-DAKVHCHIHDTVSRTFVNGALHWL 233


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