BLASTX nr result

ID: Cnidium21_contig00027441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027441
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ric...   125   4e-27
ref|XP_002330264.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_004137129.1| PREDICTED: uncharacterized WD repeat-contain...   123   2e-26
ref|XP_003540685.1| PREDICTED: uncharacterized WD repeat-contain...   121   5e-26

>ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223541786|gb|EEF43334.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 448

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 68/82 (82%)
 Frame = +3

Query: 6   SGVVYSGASDGLISYWVREKKSLYYGGALKGHKMAVLCLALAGNLVVSGSADKNICVWRR 185
           S VVY G+SDGL+++W R KK L +GG L+GHKMAVLCLA AGNLV+SGSADK+ICVWRR
Sbjct: 321 SAVVYCGSSDGLVNFWER-KKHLSHGGVLRGHKMAVLCLATAGNLVLSGSADKSICVWRR 379

Query: 186 EESGDHSCLTVLVGHSGPVKCL 251
           E  G H CL+VL GH GPVKCL
Sbjct: 380 EPGGIHICLSVLTGHGGPVKCL 401


>ref|XP_002330264.1| predicted protein [Populus trichocarpa] gi|222871299|gb|EEF08430.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/82 (70%), Positives = 67/82 (81%)
 Frame = +3

Query: 6   SGVVYSGASDGLISYWVREKKSLYYGGALKGHKMAVLCLALAGNLVVSGSADKNICVWRR 185
           S V+Y G+SDGL+++W REK  L +GG L+GHKMAVLCLA AGNLV SGSADK+ICVWRR
Sbjct: 303 SAVIYCGSSDGLVNFWEREKL-LSHGGVLRGHKMAVLCLASAGNLVFSGSADKSICVWRR 361

Query: 186 EESGDHSCLTVLVGHSGPVKCL 251
           E  G H+CL VL GH GPVKCL
Sbjct: 362 EGGGVHTCLAVLTGHGGPVKCL 383


>ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|222849484|gb|EEE87031.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/82 (70%), Positives = 67/82 (81%)
 Frame = +3

Query: 6   SGVVYSGASDGLISYWVREKKSLYYGGALKGHKMAVLCLALAGNLVVSGSADKNICVWRR 185
           S V+Y G+SDGL+++W REK  L +GG L+GHKMAVLCLA AGNLV SGSADK+ICVWRR
Sbjct: 310 SAVIYCGSSDGLVNFWEREKH-LSHGGVLRGHKMAVLCLASAGNLVFSGSADKSICVWRR 368

Query: 186 EESGDHSCLTVLVGHSGPVKCL 251
           E  G H CL+VL GH GPVKCL
Sbjct: 369 EAGGVHICLSVLTGHGGPVKCL 390


>ref|XP_004137129.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Cucumis sativus]
           gi|449523844|ref|XP_004168933.1| PREDICTED:
           uncharacterized WD repeat-containing protein
           alr3466-like [Cucumis sativus]
          Length = 467

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/84 (69%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   ASGVVYSGASDGLISYWVREKKSLYYGGALKGHKMAVLCLALAGNLVVSGSADKNICVWR 182
           +S V+Y G+S+G+++YW  EK  L +GG L+GHK+AVLCLA AGNLV SGSADKNICVWR
Sbjct: 317 SSAVLYCGSSEGVVNYWESEKH-LSHGGVLRGHKLAVLCLATAGNLVFSGSADKNICVWR 375

Query: 183 REE-SGDHSCLTVLVGHSGPVKCL 251
           REE +G H+CL+VL GHSGPVKCL
Sbjct: 376 REENTGSHTCLSVLTGHSGPVKCL 399


>ref|XP_003540685.1| PREDICTED: uncharacterized WD repeat-containing protein
           all2124-like [Glycine max]
          Length = 468

 Score =  121 bits (304), Expect = 5e-26
 Identities = 53/81 (65%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = +3

Query: 12  VVYSGASDGLISYWVREKKSLY-YGGALKGHKMAVLCLALAGNLVVSGSADKNICVWRRE 188
           VVY G+SDGL+++W R++K  + +GG L+GHK+AVLCLA AGNLV SGSADKN+CVW+R+
Sbjct: 325 VVYCGSSDGLVNFWERDQKGGFLHGGVLRGHKLAVLCLAAAGNLVFSGSADKNVCVWKRD 384

Query: 189 ESGDHSCLTVLVGHSGPVKCL 251
           E+G H+C +VL GHSGPVKC+
Sbjct: 385 ENGFHTCHSVLTGHSGPVKCI 405


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