BLASTX nr result

ID: Cnidium21_contig00027438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027438
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83758.1| hypothetical protein VITISV_028374 [Vitis vinifera]   170   1e-41
ref|XP_002278543.1| PREDICTED: protein vip1 [Vitis vinifera] gi|...   169   2e-41
ref|XP_003534286.1| PREDICTED: uncharacterized protein LOC100797...   169   1e-40
gb|ACU23146.1| unknown [Glycine max]                                  168   3e-40
gb|ABD65158.1| RNA recognition motif (RRM)-containing protein [B...   170   4e-40

>emb|CAN83758.1| hypothetical protein VITISV_028374 [Vitis vinifera]
          Length = 782

 Score =  170 bits (431), Expect(2) = 1e-41
 Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 9/172 (5%)
 Frame = -3

Query: 808  SFRKAEDDVSSLLAKGYVLSKCALDIAKSFDERHRLTRSTSEKIASIDKRIGFSEKVIFG 629
            +FRK ED VS +LAKGY+L K A++ AKSFDE+H+LT + + K+ S DK+IGF+EK+  G
Sbjct: 604  AFRKTEDVVSGMLAKGYILGKDAVNKAKSFDEKHQLTSTATSKVVSFDKKIGFTEKISAG 663

Query: 628  ASVVNGKVQEVDQKLQV*EKVKSAYATAGQTVTNARSAVMNNEYVNSGTSMVTGAFDKVA 449
             SVVN KV+EVD K QV EK KSA+A A Q V++A SA+M N YV +G S VTGAF+KVA
Sbjct: 664  TSVVNEKVREVDHKFQVSEKTKSAFAAAEQKVSSAGSAIMKNRYVFTGASWVTGAFNKVA 723

Query: 448  SAAEEVGKNTKAKLGMAEKE---------ASTNISEAPKPSEGKEQNASVPS 320
             AAEEVG+  K K+G +E E         A  ++S++PK S   EQ+   P+
Sbjct: 724  KAAEEVGQKAKEKVGKSEDEQKRRVVEDFAQVHLSDSPKASASNEQHPYKPA 775



 Score = 26.6 bits (57), Expect(2) = 1e-41
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -1

Query: 888 AVVITLASDHQLPNAASSSP 829
           +V IT A D+QLP AA+S+P
Sbjct: 570 SVTITPAPDYQLPPAAASAP 589


>ref|XP_002278543.1| PREDICTED: protein vip1 [Vitis vinifera]
           gi|297742057|emb|CBI33844.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score =  169 bits (428), Expect(2) = 2e-41
 Identities = 90/172 (52%), Positives = 120/172 (69%), Gaps = 9/172 (5%)
 Frame = -3

Query: 808 SFRKAEDDVSSLLAKGYVLSKCALDIAKSFDERHRLTRSTSEKIASIDKRIGFSEKVIFG 629
           +FRK ED VS +LAKGY+L K A++ AKSFDE+H+LT + + K+ S DK+IGF+EK+  G
Sbjct: 104 AFRKTEDVVSGMLAKGYILGKDAVNKAKSFDEKHQLTSTATSKVVSFDKKIGFTEKISAG 163

Query: 628 ASVVNGKVQEVDQKLQV*EKVKSAYATAGQTVTNARSAVMNNEYVNSGTSMVTGAFDKVA 449
            SVVN KV+EVD K QV +K KSA+A A Q V++A SA+M N YV +G S VTGAF+KVA
Sbjct: 164 TSVVNEKVREVDHKFQVSDKTKSAFAAAEQKVSSAGSAIMKNRYVFTGASWVTGAFNKVA 223

Query: 448 SAAEEVGKNTKAKLGMAEKE---------ASTNISEAPKPSEGKEQNASVPS 320
            AAEEVG+  K K+G +E E         A  ++S++PK S   EQ+   P+
Sbjct: 224 KAAEEVGQKAKEKVGKSEDEQKRRVVEDFAQVHLSDSPKASASNEQHPYKPA 275



 Score = 26.6 bits (57), Expect(2) = 2e-41
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -1

Query: 888 AVVITLASDHQLPNAASSSP 829
           +V IT A D+QLP AA+S+P
Sbjct: 70  SVTITPAPDYQLPPAAASAP 89


>ref|XP_003534286.1| PREDICTED: uncharacterized protein LOC100797009 [Glycine max]
          Length = 280

 Score =  169 bits (428), Expect(2) = 1e-40
 Identities = 90/171 (52%), Positives = 122/171 (71%), Gaps = 8/171 (4%)
 Frame = -3

Query: 808 SFRKAEDDVSSLLAKGYVLSKCALDIAKSFDERHRLTRSTSEKIASIDKRIGFSEKVIFG 629
           +FRKAED VS +LAKG++L K A++ AK+FDE+H+L+ + S K+AS D++IG SEK+  G
Sbjct: 103 AFRKAEDVVSGMLAKGFILGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGLSEKISAG 162

Query: 628 ASVVNGKVQEVDQKLQV*EKVKSAYATAGQTVTNARSAVMNNEYVNSGTSMVTGAFDKVA 449
           A+VV  +V+EVDQK QV EK KSA+A A QTV+NA SA+M N YV +G S VTGAF KV+
Sbjct: 163 ATVVGDRVREVDQKFQVSEKTKSAFAAAEQTVSNAGSAIMKNRYVLTGASWVTGAFSKVS 222

Query: 448 SAAEEVGKNTKAKLGMAEKEASTNI--------SEAPKPSEGKEQNASVPS 320
            AA EVG+ TK K+  AE++    +        SE+PK +E  EQ +S P+
Sbjct: 223 KAAGEVGQKTKEKVESAEEQQKRKVEDQYAQVLSESPKAAEASEQKSSKPA 273



 Score = 24.3 bits (51), Expect(2) = 1e-40
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 885 VVITLASDHQLPNAASSSPL 826
           V I+L  D+QLP AA +SP+
Sbjct: 71  VTISLDPDYQLPPAALASPV 90


>gb|ACU23146.1| unknown [Glycine max]
          Length = 280

 Score =  168 bits (425), Expect(2) = 3e-40
 Identities = 90/171 (52%), Positives = 121/171 (70%), Gaps = 8/171 (4%)
 Frame = -3

Query: 808 SFRKAEDDVSSLLAKGYVLSKCALDIAKSFDERHRLTRSTSEKIASIDKRIGFSEKVIFG 629
           +FRKAED VS +LAKG++L K A++ AK+FDE+H+L+ + S K+AS D++IG SEK+  G
Sbjct: 103 AFRKAEDVVSGMLAKGFILGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGLSEKISAG 162

Query: 628 ASVVNGKVQEVDQKLQV*EKVKSAYATAGQTVTNARSAVMNNEYVNSGTSMVTGAFDKVA 449
           A+VV  +V+EVDQK QV EK KSA+A A QTV+NA SA+M N YV +G S VTGAF KV 
Sbjct: 163 ATVVGDRVREVDQKFQVSEKTKSAFAAAEQTVSNAGSAIMKNRYVLTGASWVTGAFSKVF 222

Query: 448 SAAEEVGKNTKAKLGMAEKEASTNI--------SEAPKPSEGKEQNASVPS 320
            AA EVG+ TK K+  AE++    +        SE+PK +E  EQ +S P+
Sbjct: 223 KAAGEVGQKTKEKVESAEEQQKRKVEDQYAQVLSESPKAAEASEQKSSKPA 273



 Score = 24.3 bits (51), Expect(2) = 3e-40
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 885 VVITLASDHQLPNAASSSPL 826
           V I+L  D+QLP AA +SP+
Sbjct: 71  VTISLDPDYQLPPAALASPV 90


>gb|ABD65158.1| RNA recognition motif (RRM)-containing protein [Brassica oleracea]
          Length = 300

 Score =  170 bits (431), Expect = 4e-40
 Identities = 96/181 (53%), Positives = 123/181 (67%), Gaps = 10/181 (5%)
 Frame = -3

Query: 835 ISSCTSRGDS-FRKAEDDVSSLLAKGYVLSKCALDIAKSFDERHRLTRSTSEKIASIDKR 659
           IS     GDS  RKAED VSS+LAKG++L K A+  AKS DE+H+LT + S K+AS+DK+
Sbjct: 89  ISKSPRAGDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASLDKK 148

Query: 658 IGFSEKVIFGASVVNGKVQEVDQKLQV*EKVKSAYATAGQTVTNARSAVMNNEYVNSGTS 479
           +GF++K+  G  VV  KV+EVD K QV EK KSA A A QTV+NA SA+M N YV +G +
Sbjct: 149 LGFTDKINTGTVVVGDKVREVDHKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGAT 208

Query: 478 MVTGAFDKVASAAEEVGKNTKAKLGMAEKE---------ASTNISEAPKPSEGKEQNASV 326
            VTGAF+KVA AAEEVG+  K K+GMAE+E         A  ++SE+PK    KE +   
Sbjct: 209 WVTGAFNKVAKAAEEVGQKAKEKVGMAEEEDKRKVVDEFARVHLSESPKAPSSKEDDVHE 268

Query: 325 P 323
           P
Sbjct: 269 P 269


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