BLASTX nr result

ID: Cnidium21_contig00027413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027413
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15390.3| unnamed protein product [Vitis vinifera]              378   e-102
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein...   378   e-102
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2...   351   1e-94
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu...   348   2e-93
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein...   347   3e-93

>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  378 bits (970), Expect = e-102
 Identities = 199/326 (61%), Positives = 227/326 (69%), Gaps = 1/326 (0%)
 Frame = +3

Query: 3    GLGFDPFKNAPEFRERKRARVSEVKEGGQGKSLSTKNSLFGFKSERVAPGFGIGXXXXXX 182
            GLG+DPFK+APEFRE+KR R+S  KE      L  KN LF FKS +VAPGFGIG      
Sbjct: 250  GLGYDPFKHAPEFREKKRLRMSGKKE------LGLKNDLFAFKSRKVAPGFGIGALEELD 303

Query: 183  XXXXXVYASGYDFGGSYVQEIGEPTRLFLEDSKKKGEKEHGVLHGFKVASVTDYQTERFN 362
                 VYASGYDF  +Y+QE+ EP+ L +E  +K G KE GVL GFKVAS  DYQ ERF+
Sbjct: 304  VEDEDVYASGYDFEDNYIQEVEEPSGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFD 363

Query: 363  PPVIPKDFVPRHAFSAPLEDNYKL-GDLXXXXXXXXGDKDLKVLIEGVATLVARCGKLFE 539
            PPV+PK+FVP H F APL+D+ K  GD          D +LK+LIEGVATLVARCGKLFE
Sbjct: 364  PPVVPKNFVPHHKFHAPLDDSNKHDGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFE 423

Query: 540  DLSREKNQSNPLFSFLNGGDGHQYYFRKLWEENQKRNDHNKQLFVGKLYPTEQKMTAESR 719
            DLSREKNQSNPLFSFL GG+G  YY RKLWEE QK ND +KQL   K  PT QKMTAESR
Sbjct: 424  DLSREKNQSNPLFSFLTGGNGCDYYARKLWEERQKHNDKSKQLLDVKSSPTVQKMTAESR 483

Query: 720  GKILGEKALEXXXXXXXXXXXXCATVNLQVNLSDTFTNPVSFAEPQEVAKPFRDDPPKQT 899
            GKILGE+ LE               + LQ NLSDTFT P S  E  E+AKPF++DP KQ 
Sbjct: 484  GKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASLKELSEIAKPFKEDPAKQE 543

Query: 900  RFEQYLKEKYRGGLRSKESGGSSYMS 977
            RFE +LKEKY GGLRS +SGG+S MS
Sbjct: 544  RFELFLKEKYHGGLRSTDSGGASNMS 569


>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
          Length = 997

 Score =  378 bits (970), Expect = e-102
 Identities = 199/326 (61%), Positives = 227/326 (69%), Gaps = 1/326 (0%)
 Frame = +3

Query: 3    GLGFDPFKNAPEFRERKRARVSEVKEGGQGKSLSTKNSLFGFKSERVAPGFGIGXXXXXX 182
            GLG+DPFK+APEFRE+KR R+S  KE      L  KN LF FKS +VAPGFGIG      
Sbjct: 250  GLGYDPFKHAPEFREKKRLRMSGKKE------LGLKNDLFAFKSRKVAPGFGIGALEELD 303

Query: 183  XXXXXVYASGYDFGGSYVQEIGEPTRLFLEDSKKKGEKEHGVLHGFKVASVTDYQTERFN 362
                 VYASGYDF  +Y+QE+ EP+ L +E  +K G KE GVL GFKVAS  DYQ ERF+
Sbjct: 304  VEDEDVYASGYDFEDNYIQEVEEPSGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFD 363

Query: 363  PPVIPKDFVPRHAFSAPLEDNYKL-GDLXXXXXXXXGDKDLKVLIEGVATLVARCGKLFE 539
            PPV+PK+FVP H F APL+D+ K  GD          D +LK+LIEGVATLVARCGKLFE
Sbjct: 364  PPVVPKNFVPHHKFHAPLDDSNKHDGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFE 423

Query: 540  DLSREKNQSNPLFSFLNGGDGHQYYFRKLWEENQKRNDHNKQLFVGKLYPTEQKMTAESR 719
            DLSREKNQSNPLFSFL GG+G  YY RKLWEE QK ND +KQL   K  PT QKMTAESR
Sbjct: 424  DLSREKNQSNPLFSFLTGGNGCDYYARKLWEERQKHNDKSKQLLDVKSSPTVQKMTAESR 483

Query: 720  GKILGEKALEXXXXXXXXXXXXCATVNLQVNLSDTFTNPVSFAEPQEVAKPFRDDPPKQT 899
            GKILGE+ LE               + LQ NLSDTFT P S  E  E+AKPF++DP KQ 
Sbjct: 484  GKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASLKELSEIAKPFKEDPAKQE 543

Query: 900  RFEQYLKEKYRGGLRSKESGGSSYMS 977
            RFE +LKEKY GGLRS +SGG+S MS
Sbjct: 544  RFELFLKEKYHGGLRSTDSGGASNMS 569


>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  351 bits (901), Expect = 1e-94
 Identities = 193/327 (59%), Positives = 218/327 (66%), Gaps = 2/327 (0%)
 Frame = +3

Query: 3    GLGFDPFKNAPEFRERKRARVSEVKEGGQGKSLSTKNSLFGFKSERVAPGFGIGXXXXXX 182
            GLG+DP+K+APEFRE+KR RVS  +  G  ++LS K+SLFG KS R APGFGIG      
Sbjct: 251  GLGYDPYKHAPEFREKKRTRVSGKRGSGNKQALSIKDSLFGLKSGRAAPGFGIGALEDYD 310

Query: 183  XXXXXVYASGYDFGGSYVQEIGEPTRLFLEDSKKKGEKEHGVLHGFKVASVTDYQTERFN 362
                 VYA+ YD   +Y+QE  EP R   E+  K   KE GVL GFKVAS +DYQ ERF+
Sbjct: 311  AEDEDVYATAYDIEDTYIQEDEEPLRSNTENKPKLVWKEQGVLPGFKVASNSDYQLERFD 370

Query: 363  PPVIPKDFVPRHAFSAPLEDNYKLGDL--XXXXXXXXGDKDLKVLIEGVATLVARCGKLF 536
            PPVIPKDF+P H F  PLE + K   L           D + KVLIEGVATLVARCGKLF
Sbjct: 371  PPVIPKDFLPHHKFPGPLEFDKKPATLSPPPPEVPPPEDDNSKVLIEGVATLVARCGKLF 430

Query: 537  EDLSREKNQSNPLFSFLNGGDGHQYYFRKLWEENQKRNDHNKQLFVGKLYPTEQKMTAES 716
            EDLSREKNQSNPLFSFL GG+GH YY RKLWEE QKRN   K    GKL  +  KMT ES
Sbjct: 431  EDLSREKNQSNPLFSFLTGGNGHDYYSRKLWEEQQKRNGQKKIALDGKLSSSVDKMTVES 490

Query: 717  RGKILGEKALEXXXXXXXXXXXXCATVNLQVNLSDTFTNPVSFAEPQEVAKPFRDDPPKQ 896
            RGKILGE  LE               VNL  NLSDTFT P S +E  EVAKPF+DDP KQ
Sbjct: 491  RGKILGEMPLE-RSSRDLSSSIASVNVNLPFNLSDTFTKPESSSEFPEVAKPFQDDPGKQ 549

Query: 897  TRFEQYLKEKYRGGLRSKESGGSSYMS 977
             RFEQ+LKEKY+GG+RS  S G+S MS
Sbjct: 550  ERFEQFLKEKYQGGIRSTASAGASNMS 576


>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
            gi|223549179|gb|EEF50668.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1000

 Score =  348 bits (892), Expect = 2e-93
 Identities = 184/325 (56%), Positives = 222/325 (68%)
 Frame = +3

Query: 3    GLGFDPFKNAPEFRERKRARVSEVKEGGQGKSLSTKNSLFGFKSERVAPGFGIGXXXXXX 182
            GLG+DP+K+APEFRE+KR+RVS+ +E G  K+L  ++ LFGFKS + APGFGIG      
Sbjct: 249  GLGYDPYKHAPEFREKKRSRVSDNREPGNRKALLMRDGLFGFKSGKAAPGFGIGALEEYD 308

Query: 183  XXXXXVYASGYDFGGSYVQEIGEPTRLFLEDSKKKGEKEHGVLHGFKVASVTDYQTERFN 362
                 +Y + YDF  + V+E+ EP R+  +  +K   KE GVL GF+VAS +DYQ ERF+
Sbjct: 309  AEDEDLYGTAYDFEETCVEEVEEPARISTDHKQKLVWKEQGVLPGFRVASNSDYQLERFD 368

Query: 363  PPVIPKDFVPRHAFSAPLEDNYKLGDLXXXXXXXXGDKDLKVLIEGVATLVARCGKLFED 542
            PPVIPKDFVP H F   L+ + K             D +LK+LIEGVATLVARCGKLFED
Sbjct: 369  PPVIPKDFVPHHKFPGSLQADDKHTIPPPPEVPPPDDNNLKLLIEGVATLVARCGKLFED 428

Query: 543  LSREKNQSNPLFSFLNGGDGHQYYFRKLWEENQKRNDHNKQLFVGKLYPTEQKMTAESRG 722
            LSR+KNQSNPLFSFLNGG+GH+YY RKLWEE QK ND       GK   + Q+MTAESR 
Sbjct: 429  LSRDKNQSNPLFSFLNGGNGHEYYARKLWEECQKCNDQKHLALDGKSSSSVQRMTAESRA 488

Query: 723  KILGEKALEXXXXXXXXXXXXCATVNLQVNLSDTFTNPVSFAEPQEVAKPFRDDPPKQTR 902
             +LGEK LE             A  NLQ NLSDTF  P S++E  EVAKPF+DDP KQ R
Sbjct: 489  NLLGEKPLE-RSLKENTSSVASADFNLQFNLSDTFIKPASYSELPEVAKPFKDDPAKQER 547

Query: 903  FEQYLKEKYRGGLRSKESGGSSYMS 977
            FEQ+LKEKY GGLRS +S G+S MS
Sbjct: 548  FEQFLKEKYYGGLRSMDSVGASNMS 572


>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus]
          Length = 1001

 Score =  347 bits (890), Expect = 3e-93
 Identities = 187/327 (57%), Positives = 221/327 (67%), Gaps = 2/327 (0%)
 Frame = +3

Query: 3    GLGFDPFKNAPEFRERKRARVSEVKEGGQGKSLSTKNSLFGFKSERVAPGFGIGXXXXXX 182
            GLGFDP+K+APEF E+KRAR +  +EG + K  STKN+LFGF++ER+A GFGIG      
Sbjct: 250  GLGFDPYKHAPEFMEKKRARTAGNQEGYK-KVFSTKNNLFGFRTERIASGFGIGALEELD 308

Query: 183  XXXXXVYASGYDFGGSYVQEIGEPTRLFLEDSKKK--GEKEHGVLHGFKVASVTDYQTER 356
                 VY SGY+F  +YVQE  EP    + D K+K  G K  GVL GF++AS +DYQ ER
Sbjct: 309  VEDEDVYTSGYEFEETYVQEEDEPPSKMITDGKQKLIGRKVEGVLLGFRIASKSDYQMER 368

Query: 357  FNPPVIPKDFVPRHAFSAPLEDNYKLGDLXXXXXXXXGDKDLKVLIEGVATLVARCGKLF 536
            F+PPVIPKDF+P H F+ PL   YKL D          D +LK+LIEGVATLVARCGKLF
Sbjct: 369  FDPPVIPKDFIPHHKFAGPLIGGYKLADTPPVEVPPPEDNNLKLLIEGVATLVARCGKLF 428

Query: 537  EDLSREKNQSNPLFSFLNGGDGHQYYFRKLWEENQKRNDHNKQLFVGKLYPTEQKMTAES 716
            EDLSREKN+SNPLFSFLNGG G +YY RKLWEE  KR D  K  F  KL P+ +KMTAES
Sbjct: 429  EDLSREKNKSNPLFSFLNGGTGQEYYSRKLWEEQLKRVDQPKPQFDDKLSPSLKKMTAES 488

Query: 717  RGKILGEKALEXXXXXXXXXXXXCATVNLQVNLSDTFTNPVSFAEPQEVAKPFRDDPPKQ 896
            RGKILGEK L                V++Q NLSDTFT P S     E+ KPF+DD  KQ
Sbjct: 489  RGKILGEKPLARSAKELNPPAASDG-VHVQYNLSDTFTKPTSSGGMPEIVKPFKDDSAKQ 547

Query: 897  TRFEQYLKEKYRGGLRSKESGGSSYMS 977
             RFEQ+LKEKY+GGLR+    G+  MS
Sbjct: 548  ERFEQFLKEKYQGGLRTGAPVGAINMS 574


Top