BLASTX nr result

ID: Cnidium21_contig00027340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027340
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64...   201   2e-49
ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane prot...   198   1e-48
ref|XP_002297922.1| predicted protein [Populus trichocarpa] gi|2...   192   9e-47
ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|2...   186   4e-45
gb|AFK48557.1| unknown [Lotus japonicus]                              185   9e-45

>ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane
           protein slr0305 [Vitis vinifera]
          Length = 324

 Score =  201 bits (511), Expect = 2e-49
 Identities = 101/162 (62%), Positives = 122/162 (75%), Gaps = 4/162 (2%)
 Frame = +2

Query: 320 MPDFNEE----KKDTDHNVTRAKEDSEYVRLVISSELRTLDADILQPRSQPRIRSFNWWV 487
           MP+ +EE      ++ HNV   +E+SEYVRLVIS+E R  +ADILQP+++ RI+SF WW+
Sbjct: 1   MPNSSEETDKLNTNSGHNV---REESEYVRLVISNEARLSEADILQPQAETRIKSFIWWL 57

Query: 488 KAIISCLITSVALLIFLKWGVPFLFEKILVPMMQWEATAFGRXXXXXXXXXXXXXXXXXX 667
           KA+I C++  + LLIFLKWG PF+FEKIL+P+M WEATAFGR                  
Sbjct: 58  KALIFCVVNVIFLLIFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLL 117

Query: 668 IPSGPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYMIGLLFR 793
           IPSGPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPY+IGLLFR
Sbjct: 118 IPSGPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFR 159


>ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
           vinifera] gi|297739420|emb|CBI29602.3| unnamed protein
           product [Vitis vinifera]
          Length = 320

 Score =  198 bits (504), Expect = 1e-48
 Identities = 98/159 (61%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
 Frame = +2

Query: 320 MPDFNEEKKDTDHNVTR-AKEDSEYVRLVISSELRTLDADILQPRSQPRIRSFNWWVKAI 496
           MP+ +EE    + N     +E+SEYVRLVIS+E R  +ADILQP+++ RI+SF WW KA+
Sbjct: 1   MPNSSEETDKLNTNSGHDVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWFKAL 60

Query: 497 ISCLITSVALLIFLKWGVPFLFEKILVPMMQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 676
           I C++  + LL+FLKWG PF+FEKIL+P+M WEATAFGR                  IPS
Sbjct: 61  IFCVVNIIFLLVFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 677 GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYMIGLLFR 793
           GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPY+IGLLFR
Sbjct: 121 GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFR 159


>ref|XP_002297922.1| predicted protein [Populus trichocarpa] gi|222845180|gb|EEE82727.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  192 bits (487), Expect = 9e-47
 Identities = 94/159 (59%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
 Frame = +2

Query: 320 MPDFNEEK-KDTDHNVTRAKEDSEYVRLVISSELRTLDADILQPRSQPRIRSFNWWVKAI 496
           MP   EE   D+       +EDSEYVRLVIS E R  + DI Q +S+ R+++F WW+KA+
Sbjct: 1   MPQTAEESGNDSGKLEHHGREDSEYVRLVISDEPRAPEFDISQLQSRARMKAFIWWIKAL 60

Query: 497 ISCLITSVALLIFLKWGVPFLFEKILVPMMQWEATAFGRXXXXXXXXXXXXXXXXXXIPS 676
           I CL+ ++ LL+F+KWGVPFLFEK+L+PMM+WEATAFGR                  IPS
Sbjct: 61  IWCLVITILLLVFVKWGVPFLFEKVLLPMMEWEATAFGRPVLALVLTASLALFPVFLIPS 120

Query: 677 GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYMIGLLFR 793
           GPSMWLAGMIFGYG+GFVIIM+GTTIGMVLPY+IGL+FR
Sbjct: 121 GPSMWLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFR 159


>ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  186 bits (473), Expect = 4e-45
 Identities = 94/156 (60%), Positives = 116/156 (74%), Gaps = 3/156 (1%)
 Frame = +2

Query: 335 EEKKDT---DHNVTRAKEDSEYVRLVISSELRTLDADILQPRSQPRIRSFNWWVKAIISC 505
           E +KD+   +HNV   +EDSEYVRLVIS E R  D DI Q +S+ RI++F  W+KA+I C
Sbjct: 7   ESRKDSGKLEHNV---REDSEYVRLVISDEPRVGDFDISQVQSRARIKAFIRWIKALIWC 63

Query: 506 LITSVALLIFLKWGVPFLFEKILVPMMQWEATAFGRXXXXXXXXXXXXXXXXXXIPSGPS 685
           L+ +  +L+FLKWGV FLF+K+L+PMM+WEATAFGR                  IPSGPS
Sbjct: 64  LVIATLVLVFLKWGVSFLFDKVLLPMMEWEATAFGRPVLSLVLTASLALFPVFLIPSGPS 123

Query: 686 MWLAGMIFGYGLGFVIIMIGTTIGMVLPYMIGLLFR 793
           MWLAGMIFGYG+GFVIIM+GTTIGMVLPY+IGL+FR
Sbjct: 124 MWLAGMIFGYGIGFVIIMVGTTIGMVLPYLIGLVFR 159


>gb|AFK48557.1| unknown [Lotus japonicus]
          Length = 314

 Score =  185 bits (470), Expect = 9e-45
 Identities = 92/160 (57%), Positives = 112/160 (70%), Gaps = 2/160 (1%)
 Frame = +2

Query: 320 MPDFNEE--KKDTDHNVTRAKEDSEYVRLVISSELRTLDADILQPRSQPRIRSFNWWVKA 493
           MP+ ++E  K  T  +  R +  SEYVRLVIS E R ++ +++QPR + RI SF WW+K 
Sbjct: 3   MPESSKEMEKHATPGHHGRGRGSSEYVRLVISDEPRAVETEMIQPREESRINSFRWWMKV 62

Query: 494 IISCLITSVALLIFLKWGVPFLFEKILVPMMQWEATAFGRXXXXXXXXXXXXXXXXXXIP 673
           ++ CL + V  L+ LKWGVPF+FEKIL P M+WEATAFGR                   P
Sbjct: 63  LLWCLASVVLGLVLLKWGVPFVFEKILYPTMEWEATAFGRPALALVLVASLALFPVILFP 122

Query: 674 SGPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYMIGLLFR 793
           SGPSMWLAGMIFGYGLGFVIIM+GTTIGMVLPY+IGLLFR
Sbjct: 123 SGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLFR 162


Top