BLASTX nr result

ID: Cnidium21_contig00027333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027333
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   275   4e-72
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   274   1e-71
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...   268   6e-70
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...   259   2e-67
ref|NP_001237384.1| uncharacterized protein LOC100305835 [Glycin...   258   5e-67

>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  275 bits (704), Expect = 4e-72
 Identities = 129/182 (70%), Positives = 149/182 (81%)
 Frame = -1

Query: 547 MAWWGGVDETRVLVSSDCGGDGDNAGCLLSLCHPKTGNPTSYFLTNGVLQEIHWFKTAYG 368
           MAW  GV+ETR+L++ D    G+  G  LSL HPK+G  T Y   NG LQE++WFK +YG
Sbjct: 1   MAWSEGVEETRLLIAPDVNAIGNGLGQFLSLRHPKSGKATCYLFKNGTLQELNWFKQSYG 60

Query: 367 SWFLGDYVCEDGRLYAATPVDPVFILLPIFEEARMKKGEDPGKFRQLDEIIFIQGYPGYQ 188
           SWFLGDYVCEDGRLY AT VDPVFI+LPIFEEARMKK +DPGKFRQLDEI+F+  YPGYQ
Sbjct: 61  SWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQ 120

Query: 187 HLLSIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLLYKVHQLKQTLPTLDRNYAAQADK 8
           HL+ IA+  MQVVC+ KEIGS+KFFRL+DSKVLAWL YKVHQLKQ LPTLD+NYAA+  K
Sbjct: 121 HLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKK 180

Query: 7   DT 2
           DT
Sbjct: 181 DT 182


>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  274 bits (700), Expect = 1e-71
 Identities = 128/182 (70%), Positives = 148/182 (81%)
 Frame = -1

Query: 547 MAWWGGVDETRVLVSSDCGGDGDNAGCLLSLCHPKTGNPTSYFLTNGVLQEIHWFKTAYG 368
           MAW  GV+ETR+L++ D    G+  G  LS  HPK+G  T Y   NG LQE++WFK +YG
Sbjct: 1   MAWSEGVEETRLLIAPDVNAIGNGLGQFLSFRHPKSGKATCYLFKNGTLQELNWFKQSYG 60

Query: 367 SWFLGDYVCEDGRLYAATPVDPVFILLPIFEEARMKKGEDPGKFRQLDEIIFIQGYPGYQ 188
           SWFLGDYVCEDGRLY AT VDPVFI+LPIFEEARMKK +DPGKFRQLDEI+F+  YPGYQ
Sbjct: 61  SWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQ 120

Query: 187 HLLSIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLLYKVHQLKQTLPTLDRNYAAQADK 8
           HL+ IA+  MQVVC+ KEIGS+KFFRL+DSKVLAWL YKVHQLKQ LPTLD+NYAA+  K
Sbjct: 121 HLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKK 180

Query: 7   DT 2
           DT
Sbjct: 181 DT 182


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
           gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
           H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score =  268 bits (685), Expect = 6e-70
 Identities = 125/182 (68%), Positives = 152/182 (83%)
 Frame = -1

Query: 547 MAWWGGVDETRVLVSSDCGGDGDNAGCLLSLCHPKTGNPTSYFLTNGVLQEIHWFKTAYG 368
           MAW  GV+ETR+L++ D G   +  GC LSL HPK+GNPT +   N +L+EIHWFK +Y 
Sbjct: 1   MAWCEGVEETRILIAPDHGVKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQSYS 60

Query: 367 SWFLGDYVCEDGRLYAATPVDPVFILLPIFEEARMKKGEDPGKFRQLDEIIFIQGYPGYQ 188
           SWFLGDYV EDGRLY+ATPVDPVFI LPIFEEARMKKG+D GKFRQLD+I+FI GYPGY 
Sbjct: 61  SWFLGDYVAEDGRLYSATPVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYPGYL 120

Query: 187 HLLSIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLLYKVHQLKQTLPTLDRNYAAQADK 8
           HLL +A+K MQVVC+ KE+GS++FFRL+DSKVLAWL +KV QLK+TL TLD+NYAA+ +K
Sbjct: 121 HLLPLAEKFMQVVCEVKEVGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREEK 180

Query: 7   DT 2
           +T
Sbjct: 181 ET 182


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
           gi|223543075|gb|EEF44610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score =  259 bits (663), Expect = 2e-67
 Identities = 123/177 (69%), Positives = 147/177 (83%)
 Frame = -1

Query: 532 GVDETRVLVSSDCGGDGDNAGCLLSLCHPKTGNPTSYFLTNGVLQEIHWFKTAYGSWFLG 353
           G+DETR+L++     DG   G LLSL HPK+G  T Y L N +LQE+HWFK +Y SWFLG
Sbjct: 31  GMDETRLLIAHSANADG--VGRLLSLQHPKSGKTTCYLLNNRMLQELHWFKQSYTSWFLG 88

Query: 352 DYVCEDGRLYAATPVDPVFILLPIFEEARMKKGEDPGKFRQLDEIIFIQGYPGYQHLLSI 173
           DYVC+DG LY+ATPVDPVFILLPIFEEARM+KG+DPGKFRQLDEI+FI GYPGY++L+ I
Sbjct: 89  DYVCQDGCLYSATPVDPVFILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRYLMPI 148

Query: 172 ADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLLYKVHQLKQTLPTLDRNYAAQADKDT 2
           A+  MQVVC+ KEIGS+KFFRLNDSKV AWLL KV QLKQ + +LD+NYAAQ +K+T
Sbjct: 149 AENCMQVVCEIKEIGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNT 205


>ref|NP_001237384.1| uncharacterized protein LOC100305835 [Glycine max]
           gi|255626733|gb|ACU13711.1| unknown [Glycine max]
          Length = 193

 Score =  258 bits (660), Expect = 5e-67
 Identities = 119/182 (65%), Positives = 144/182 (79%)
 Frame = -1

Query: 547 MAWWGGVDETRVLVSSDCGGDGDNAGCLLSLCHPKTGNPTSYFLTNGVLQEIHWFKTAYG 368
           M+W   V E R+LV+ D G DG+  G ++SL HPK+GN T Y   NG+LQE+ WFK  YG
Sbjct: 1   MSWCDSVQEPRILVAPDPGTDGNGLGQMISLRHPKSGNATQYLFVNGMLQELQWFKNLYG 60

Query: 367 SWFLGDYVCEDGRLYAATPVDPVFILLPIFEEARMKKGEDPGKFRQLDEIIFIQGYPGYQ 188
           SWFLGDY+ EDGR+Y +TP+DPVFI+LPIFEEARMKKG+D G+FRQLDEI+FI GYPGY 
Sbjct: 61  SWFLGDYITEDGRMYLSTPIDPVFIMLPIFEEARMKKGDDLGRFRQLDEILFIDGYPGYM 120

Query: 187 HLLSIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLLYKVHQLKQTLPTLDRNYAAQADK 8
            L+S  +  M VV + KEIGS+KFFRL+DSKVL WL YKV QLKQTLP LD+NYA Q++K
Sbjct: 121 QLMSAVENCMLVVSEVKEIGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEK 180

Query: 7   DT 2
           DT
Sbjct: 181 DT 182


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