BLASTX nr result

ID: Cnidium21_contig00027328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027328
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298240.1| ABC transporter family, pleiotropic drug res...   100   9e-20
ref|XP_003597683.1| ABC transporter G family member [Medicago tr...    99   4e-19
ref|XP_003543626.1| PREDICTED: ABC transporter G family member 3...    99   5e-19
ref|XP_003543625.1| PREDICTED: ABC transporter G family member 3...    99   5e-19
ref|XP_003543624.1| PREDICTED: ABC transporter G family member 3...    99   5e-19

>ref|XP_002298240.1| ABC transporter family, pleiotropic drug resistance protein [Populus
            trichocarpa] gi|222845498|gb|EEE83045.1| ABC transporter
            family, pleiotropic drug resistance protein [Populus
            trichocarpa]
          Length = 1436

 Score =  100 bits (250), Expect = 9e-20
 Identities = 62/113 (54%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = -3

Query: 381  YLQVIPGVLRIRDTFNLAAWMLEVSSVAAERQLRMGFAEH--SLALHQ*VKNLSKTQSLV 208
            Y + IPGV +I++ +N A WMLEVSSVAAE +L M FAE   S +LHQ  K L K  S  
Sbjct: 1080 YFEAIPGVPKIKEKYNPATWMLEVSSVAAEVRLGMDFAEQYRSSSLHQRNKALVKELS-- 1137

Query: 207  TEHTPPPRAKDLCFATDYS*SL**PFKSCL*KQ*FSYLRSSNYNSVRYFYALV 49
               TPPP A +L FAT YS S    FKSCL KQ ++Y RS +YN VRYF+ LV
Sbjct: 1138 ---TPPPGATNLYFATQYSESAWGQFKSCLWKQWWTYWRSPDYNLVRYFFTLV 1187


>ref|XP_003597683.1| ABC transporter G family member [Medicago truncatula]
            gi|355486731|gb|AES67934.1| ABC transporter G family
            member [Medicago truncatula]
          Length = 1301

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
 Frame = -3

Query: 381  YLQVIPGVLRIRDTFNLAAWMLEVSSVAAERQLRMGFAEH--SLALHQ*VKNLSKTQSLV 208
            Y + IPGV +I++ +N A WMLEVSS+AAE +L M FAE+  +  LHQ      + ++LV
Sbjct: 946  YFEAIPGVPKIKEKYNPATWMLEVSSIAAEARLGMDFAEYYKTSTLHQ------RNKALV 999

Query: 207  TE-HTPPPRAKDLCFATDYS*SL**PFKSCL*KQ*FSYLRSSNYNSVRYFYAL 52
            +E  TPPP AKD+ F+T +S S    FKSCL KQ  +Y RS +YN VRYF+ L
Sbjct: 1000 SELSTPPPGAKDVYFSTQFSQSTFGQFKSCLWKQWLTYWRSPDYNLVRYFFTL 1052


>ref|XP_003543626.1| PREDICTED: ABC transporter G family member 36-like isoform 3 [Glycine
            max]
          Length = 1457

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
 Frame = -3

Query: 381  YLQVIPGVLRIRDTFNLAAWMLEVSSVAAERQLRMGFAEH--SLALHQ*VKNLSKTQSLV 208
            Y + IPGV +I+D +N A WMLEVSS+AAE +LRM FAEH  S +L+Q      + ++L+
Sbjct: 1103 YFEAIPGVPKIKDKYNPATWMLEVSSIAAEVRLRMDFAEHYKSSSLYQ------RNKALI 1156

Query: 207  TE-HTPPPRAKDLCFATDYS*SL**PFKSCL*KQ*FSYLRSSNYNSVRYFYAL 52
             E  T PP  KDL F T YS S    FKSCL KQ  +Y RS +YN VR+F+ L
Sbjct: 1157 RELSTSPPGVKDLYFPTQYSQSTWEQFKSCLWKQRLTYWRSPDYNLVRFFFTL 1209


>ref|XP_003543625.1| PREDICTED: ABC transporter G family member 36-like isoform 2 [Glycine
            max]
          Length = 1440

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
 Frame = -3

Query: 381  YLQVIPGVLRIRDTFNLAAWMLEVSSVAAERQLRMGFAEH--SLALHQ*VKNLSKTQSLV 208
            Y + IPGV +I+D +N A WMLEVSS+AAE +LRM FAEH  S +L+Q      + ++L+
Sbjct: 1086 YFEAIPGVPKIKDKYNPATWMLEVSSIAAEVRLRMDFAEHYKSSSLYQ------RNKALI 1139

Query: 207  TE-HTPPPRAKDLCFATDYS*SL**PFKSCL*KQ*FSYLRSSNYNSVRYFYAL 52
             E  T PP  KDL F T YS S    FKSCL KQ  +Y RS +YN VR+F+ L
Sbjct: 1140 RELSTSPPGVKDLYFPTQYSQSTWEQFKSCLWKQRLTYWRSPDYNLVRFFFTL 1192


>ref|XP_003543624.1| PREDICTED: ABC transporter G family member 36-like isoform 1 [Glycine
            max]
          Length = 1434

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
 Frame = -3

Query: 381  YLQVIPGVLRIRDTFNLAAWMLEVSSVAAERQLRMGFAEH--SLALHQ*VKNLSKTQSLV 208
            Y + IPGV +I+D +N A WMLEVSS+AAE +LRM FAEH  S +L+Q      + ++L+
Sbjct: 1080 YFEAIPGVPKIKDKYNPATWMLEVSSIAAEVRLRMDFAEHYKSSSLYQ------RNKALI 1133

Query: 207  TE-HTPPPRAKDLCFATDYS*SL**PFKSCL*KQ*FSYLRSSNYNSVRYFYAL 52
             E  T PP  KDL F T YS S    FKSCL KQ  +Y RS +YN VR+F+ L
Sbjct: 1134 RELSTSPPGVKDLYFPTQYSQSTWEQFKSCLWKQRLTYWRSPDYNLVRFFFTL 1186


Top