BLASTX nr result

ID: Cnidium21_contig00027327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027327
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515648.1| zinc finger protein, putative [Ricinus commu...   152   6e-35
ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...   152   6e-35
gb|ACJ38096.1| Dof1 [Populus tomentosa]                               149   3e-34
emb|CAA08755.1| Dof zinc finger protein [Nicotiana tabacum]           149   4e-34
emb|CBI23042.3| unnamed protein product [Vitis vinifera]              149   4e-34

>ref|XP_002515648.1| zinc finger protein, putative [Ricinus communis]
           gi|223545191|gb|EEF46700.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 298

 Score =  152 bits (383), Expect = 6e-35
 Identities = 95/172 (55%), Positives = 99/172 (57%), Gaps = 9/172 (5%)
 Frame = -3

Query: 508 RPQKPQAINCPRCNSTHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRSVPVGGGSRKN 329
           RPQK  A+NCPRCNST+TKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLR+VPVGGGSRKN
Sbjct: 36  RPQKDHALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 95

Query: 328 KRXXXXXXXXSLLTKKLPHET--IITTSHQNHNIKIYGHEGTQDLNLAY-PPITTNPSYT 158
           KR          L    P  T  I    HQN N  I  H G QDLNLAY PP T N  Y 
Sbjct: 96  KRSSASSSSSKKLIINPPDLTPQIGFLHHQNPNNNIKIHHG-QDLNLAYAPPSTENHEYG 154

Query: 157 LGMPHQXXXXXXXXXXXXXXXXXXXFLKSG---RG--FSSFMSMIP-VSDSN 20
                                     LK+G   RG     FMSM P VSDSN
Sbjct: 155 NMSEFIDVTRSKTHFLNPSPAAMDQLLKTGMSSRGLMLGPFMSMQPLVSDSN 206


>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
           gi|222846699|gb|EEE84246.1| f-box family protein
           [Populus trichocarpa]
          Length = 247

 Score =  152 bits (383), Expect = 6e-35
 Identities = 77/112 (68%), Positives = 85/112 (75%), Gaps = 4/112 (3%)
 Frame = -3

Query: 508 RPQKPQAINCPRCNSTHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRSVPVGGGSRKN 329
           RPQK QA+NCPRCNST+TKFCYYNNYSL+QPRYFCKTCRRYWTEGGSLRS+PVGGGSRKN
Sbjct: 34  RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKN 93

Query: 328 KRXXXXXXXXSLLTKKLPH----ETIITTSHQNHNIKIYGHEGTQDLNLAYP 185
           KR           +KKLP      T+  TS +NH I    HEG QDLNLA+P
Sbjct: 94  KRSSASSSSS---SKKLPDLISPPTLSQTSTENHKI----HEG-QDLNLAFP 137


>gb|ACJ38096.1| Dof1 [Populus tomentosa]
          Length = 255

 Score =  149 bits (377), Expect = 3e-34
 Identities = 92/172 (53%), Positives = 101/172 (58%), Gaps = 9/172 (5%)
 Frame = -3

Query: 508 RPQKPQAINCPRCNSTHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRSVPVGGGSRKN 329
           RPQK QA+NCPRC ST+TKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLR+VPVGGGSRKN
Sbjct: 28  RPQKEQALNCPRCTSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 87

Query: 328 KRXXXXXXXXSLLT--KKLPHETIITTSHQN---HNIKIYGHEGTQDLNLAYPPITTNPS 164
           KR        +     KK P +      HQ+    N KI  HEG  DLNLAYPP     S
Sbjct: 88  KRSSSNPSSSAAAASEKKFPLDLTQPNFHQSATDQNPKI--HEGP-DLNLAYPP-----S 139

Query: 163 YTLGMPHQXXXXXXXXXXXXXXXXXXXFLKSG----RGFSSFMSMIPVSDSN 20
           +   M                       LKS     RGFS+FMS+   SDSN
Sbjct: 140 HISAME---------------------LLKSSGMNPRGFSAFMSIPAASDSN 170


>emb|CAA08755.1| Dof zinc finger protein [Nicotiana tabacum]
          Length = 262

 Score =  149 bits (376), Expect = 4e-34
 Identities = 80/118 (67%), Positives = 85/118 (72%), Gaps = 4/118 (3%)
 Frame = -3

Query: 511 PRPQKPQAINCPRCNSTHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRSVPVGGGSRK 332
           PRPQK QAINCPRCNST+TKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLR+VPVGGGSRK
Sbjct: 28  PRPQKEQAINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRK 87

Query: 331 NKRXXXXXXXXSLLT----KKLPHETIITTSHQNHNIKIYGHEGTQDLNLAYPPITTN 170
           NKR        S  T    KK+P  T I TS QN  I    H    DLNLA+ P  T+
Sbjct: 88  NKRSSSSSNNSSSSTSSSYKKIPDLT-IPTSSQNPKIINEPH----DLNLAFNPSATS 140


>emb|CBI23042.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  149 bits (376), Expect = 4e-34
 Identities = 78/113 (69%), Positives = 86/113 (76%), Gaps = 4/113 (3%)
 Frame = -3

Query: 508 RPQKPQAINCPRCNSTHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRSVPVGGGSRKN 329
           RPQK QA+NCPRCNST+TKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLR+VPVGGGSRKN
Sbjct: 28  RPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 87

Query: 328 KR--XXXXXXXXSLLTKKLPHETIIT--TSHQNHNIKIYGHEGTQDLNLAYPP 182
           KR             +KKL  + +IT   S  + N KI  HEG QDLNLA+PP
Sbjct: 88  KRSTSSSSSSSSPASSKKLLPDHLITRFPSSASQNPKI--HEG-QDLNLAFPP 137


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