BLASTX nr result

ID: Cnidium21_contig00027313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027313
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001778715.1| predicted protein [Physcomitrella patens sub...    74   1e-11
ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arab...    72   5e-11
ref|XP_001761340.1| predicted protein [Physcomitrella patens sub...    72   5e-11
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    72   7e-11
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    72   7e-11

>ref|XP_001778715.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162669930|gb|EDQ56508.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 579

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/88 (43%), Positives = 55/88 (62%)
 Frame = +3

Query: 273 HQPNYSPNRPSSRIHNQTTSRTHINQEQEHNSFDLSTNLNQLNLNADNSNVINFDAYEDI 452
           H  ++  +  S R +        +  E+E N F     +++    A+N+  INFDAYEDI
Sbjct: 58  HSASWGNSNGSGRSYGGGGRGQRVGWEREANPFANDEPVSEAIFEAENTG-INFDAYEDI 116

Query: 453 PVETTGSDIPPPVNTFAEIRLGKALDDN 536
           PVET+G+++PPPVNTFAEI LG AL++N
Sbjct: 117 PVETSGNNVPPPVNTFAEIDLGPALNEN 144


>ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arabidopsis lyrata subsp.
           lyrata] gi|297325829|gb|EFH56249.1| hypothetical protein
           ARALYDRAFT_483345 [Arabidopsis lyrata subsp. lyrata]
          Length = 627

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/63 (53%), Positives = 47/63 (74%)
 Frame = +3

Query: 348 QEQEHNSFDLSTNLNQLNLNADNSNVINFDAYEDIPVETTGSDIPPPVNTFAEIRLGKAL 527
           +E+E N FD   +  +   +  ++ VINFDAYEDIP+ET+G ++PPPVNTFAEI LG+AL
Sbjct: 109 REREVNPFDNDDSEPEPAFSEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEAL 168

Query: 528 DDN 536
           + N
Sbjct: 169 NLN 171


>ref|XP_001761340.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687346|gb|EDQ73729.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 589

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/62 (56%), Positives = 47/62 (75%)
 Frame = +3

Query: 351 EQEHNSFDLSTNLNQLNLNADNSNVINFDAYEDIPVETTGSDIPPPVNTFAEIRLGKALD 530
           E+E N F     +++    A+N+  INFDAYEDIPVET+G+++PPPVNTFAEI LG AL+
Sbjct: 95  EREANPFANDEQVSETIFEAENTG-INFDAYEDIPVETSGNNVPPPVNTFAEIDLGPALN 153

Query: 531 DN 536
           +N
Sbjct: 154 EN 155


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 35/63 (55%), Positives = 46/63 (73%)
 Frame = +3

Query: 348 QEQEHNSFDLSTNLNQLNLNADNSNVINFDAYEDIPVETTGSDIPPPVNTFAEIRLGKAL 527
           +E+E N F+   N  +     +N+  INFDAYEDIPVET+G ++PPPVNTFAEI LG+AL
Sbjct: 112 REREVNPFEEEDNAEEAFSEQENTG-INFDAYEDIPVETSGDNVPPPVNTFAEIDLGEAL 170

Query: 528 DDN 536
           + N
Sbjct: 171 NQN 173


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 614

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 35/63 (55%), Positives = 46/63 (73%)
 Frame = +3

Query: 348 QEQEHNSFDLSTNLNQLNLNADNSNVINFDAYEDIPVETTGSDIPPPVNTFAEIRLGKAL 527
           +E+E N F+   N  +     +N+  INFDAYEDIPVET+G ++PPPVNTFAEI LG+AL
Sbjct: 107 REREVNPFEEEDNAEEAFSEQENTG-INFDAYEDIPVETSGDNVPPPVNTFAEIDLGEAL 165

Query: 528 DDN 536
           + N
Sbjct: 166 NQN 168


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