BLASTX nr result

ID: Cnidium21_contig00027296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027296
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531411.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
gb|AAB61119.1| F20P5.8 [Arabidopsis thaliana]                          60   2e-07
ref|NP_177177.2| RNA recognition motif-containing protein [Arabi...    60   2e-07
ref|XP_002888760.1| hypothetical protein ARALYDRAFT_894820 [Arab...    60   2e-07
ref|XP_003517742.1| PREDICTED: uncharacterized protein LOC100776...    59   4e-07

>ref|XP_002531411.1| conserved hypothetical protein [Ricinus communis]
           gi|223529004|gb|EEF30995.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 500

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 181 IVVPMRNMKKWLENKPLGFGEGKEYDTTIEDKLAEEIEQSR 303
           +++P   MKKWLENKP GFGEGK YDT +EDKL EEIEQSR
Sbjct: 128 MLLPFGKMKKWLENKPRGFGEGKVYDTFVEDKLLEEIEQSR 168


>gb|AAB61119.1| F20P5.8 [Arabidopsis thaliana]
          Length = 510

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +1

Query: 187 VPMRNMKKWLENKPLGFGEGKEYDTTIEDKLAEEIEQS 300
           +PM  MKKWLE KP GFG GK+Y+T IEDKL +EIEQS
Sbjct: 112 LPMDKMKKWLEKKPRGFGLGKKYETLIEDKLLDEIEQS 149


>ref|NP_177177.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|28392945|gb|AAO41908.1| unknown protein [Arabidopsis
           thaliana] gi|28827688|gb|AAO50688.1| unknown protein
           [Arabidopsis thaliana] gi|332196911|gb|AEE35032.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 538

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +1

Query: 187 VPMRNMKKWLENKPLGFGEGKEYDTTIEDKLAEEIEQS 300
           +PM  MKKWLE KP GFG GK+Y+T IEDKL +EIEQS
Sbjct: 112 LPMDKMKKWLEKKPRGFGLGKKYETLIEDKLLDEIEQS 149


>ref|XP_002888760.1| hypothetical protein ARALYDRAFT_894820 [Arabidopsis lyrata subsp.
           lyrata] gi|297334601|gb|EFH65019.1| hypothetical protein
           ARALYDRAFT_894820 [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +1

Query: 187 VPMRNMKKWLENKPLGFGEGKEYDTTIEDKLAEEIEQS 300
           +PM  MKKWLE KP GFG GK+Y+T+IEDKL +EI+QS
Sbjct: 112 LPMDKMKKWLEKKPRGFGLGKKYETSIEDKLLDEIQQS 149


>ref|XP_003517742.1| PREDICTED: uncharacterized protein LOC100776108 [Glycine max]
          Length = 446

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +1

Query: 184 VVPMRNMKKWLENKPLGFGEGKEYDTTIEDKLAEEIEQSRI 306
           ++ +  M KW E KP GFGEGK YDT++EDKL EE+ QSRI
Sbjct: 116 MLSLEKMNKWFEKKPRGFGEGKVYDTSVEDKLLEEMRQSRI 156


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