BLASTX nr result

ID: Cnidium21_contig00027295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027295
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42086.1| unknown [Lotus japonicus]                               91   1e-16
ref|XP_004137238.1| PREDICTED: uroporphyrinogen decarboxylase 1,...    89   3e-16
ref|XP_003540489.1| PREDICTED: uroporphyrinogen decarboxylase 1,...    89   3e-16
ref|XP_004156545.1| PREDICTED: uroporphyrinogen decarboxylase 1,...    88   8e-16
gb|AFK37069.1| unknown [Medicago truncatula]                           87   1e-15

>gb|AFK42086.1| unknown [Lotus japonicus]
          Length = 407

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -3

Query: 242 SSCNIGWKSSSTLFQELGLLSSNNNALFVSPKTK-SFKVSASSSTADPLLVKAAKGEPVS 66
           +SC +GWKSSS LF        N  +    PK K S   SA+SS++DPLLVKA +G+P S
Sbjct: 6   NSCGLGWKSSS-LFAHSTSTGFNLISPSFKPKPKFSLTCSAASSSSDPLLVKATRGDPAS 64

Query: 65  RPPAWMMRQAGRYMAVYKKLA 3
           RPPAWMMRQAGRYMAVY+KLA
Sbjct: 65  RPPAWMMRQAGRYMAVYRKLA 85


>ref|XP_004137238.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Cucumis sativus]
          Length = 414

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 5/94 (5%)
 Frame = -3

Query: 269 MSCLFTFVASSC-NIGWKSSSTLFQELGLLSSNNNALFVSPK---TKSFKVSASSSTADP 102
           M C F   AS+C ++GW+SSS L Q   L S+N+    +S +    K   V+ SSS +DP
Sbjct: 1   MGC-FASPASACTSLGWRSSSFLLQS-PLKSTNSINFLLSTRRVSNKPISVTCSSSLSDP 58

Query: 101 -LLVKAAKGEPVSRPPAWMMRQAGRYMAVYKKLA 3
            LLVKAA+G+PVSRPPAWMMRQAGRYMA+Y+KLA
Sbjct: 59  PLLVKAARGDPVSRPPAWMMRQAGRYMAIYRKLA 92


>ref|XP_003540489.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Glycine max]
          Length = 410

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/89 (57%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
 Frame = -3

Query: 242 SSCNIGWKSSSTLFQELGLLSSNNNALFVSPKTK---------SFKVSASSSTADPLLVK 90
           +S  +GWK SS   Q      SNN     SP  K         S   SA+SS++DPLLVK
Sbjct: 6   NSSALGWKHSSLFVQ------SNNGFNVASPPFKHKPPRSSKFSLTCSAASSSSDPLLVK 59

Query: 89  AAKGEPVSRPPAWMMRQAGRYMAVYKKLA 3
           AA+G+PVSRPPAWMMRQAGRYMAVYKKLA
Sbjct: 60  AARGDPVSRPPAWMMRQAGRYMAVYKKLA 88


>ref|XP_004156545.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Cucumis sativus]
          Length = 466

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/86 (58%), Positives = 64/86 (74%), Gaps = 5/86 (5%)
 Frame = -3

Query: 245 ASSC-NIGWKSSSTLFQELGLLSSNNNALFVSPK---TKSFKVSASSSTADP-LLVKAAK 81
           AS+C ++GW+SSS L Q   L S+N+    +S +    K   V+ SSS +DP LLVKAA+
Sbjct: 60  ASACTSLGWRSSSFLLQS-PLKSTNSINFLLSTRRVSNKPISVTCSSSLSDPPLLVKAAR 118

Query: 80  GEPVSRPPAWMMRQAGRYMAVYKKLA 3
           G+PVSRPPAWMMRQAGRYMA+Y+KLA
Sbjct: 119 GDPVSRPPAWMMRQAGRYMAIYRKLA 144


>gb|AFK37069.1| unknown [Medicago truncatula]
          Length = 306

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/79 (56%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
 Frame = -3

Query: 230 IGWKSSSTLFQELGLLSSNNNALFVSPKTKSFKVS---ASSSTADPLLVKAAKGEPVSRP 60
           +GWKSS  LFQ+    +  ++     P    F ++   ASSS++DPLLVKAA+G+PVSRP
Sbjct: 12  LGWKSSP-LFQQSNCFNFLSSPFKPKPSLTKFTLTCSAASSSSSDPLLVKAARGDPVSRP 70

Query: 59  PAWMMRQAGRYMAVYKKLA 3
           PAWMMRQAGRYMA+Y+KLA
Sbjct: 71  PAWMMRQAGRYMAIYRKLA 89


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