BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027291
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   310   2e-82
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   307   2e-81
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...   299   4e-79
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   299   6e-79
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   295   8e-78

>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  310 bits (795), Expect = 2e-82
 Identities = 159/269 (59%), Positives = 190/269 (70%), Gaps = 6/269 (2%)
 Frame = -3

Query: 789 QQREMENEKNDVNQQNKAFVIEIPSYEQVIEGNSQPKTFS------TFSQAFNFIKNSDL 628
           Q+++ E E+++     K  VI+IPSY++VIE +  PKT S      TFSQAF+FIK+S+ 
Sbjct: 4   QEQQEEEERSNRKSNAKKVVIQIPSYQEVIESSQNPKTESLFKPSQTFSQAFSFIKDSEF 63

Query: 627 YXXXXXXXXXXXXXXXXXXSGGINVEXXXXXXXXXXXXXSYFRPHGNSRNAILVSHRQKG 448
           Y                  +  +                      GN RN+ILVSHRQKG
Sbjct: 64  YTPPPQSSAVSNNANSIQTTQSVPSPSQSVALT------------GNYRNSILVSHRQKG 111

Query: 447 NPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFRIRELQKKFKLRXX 268
           NPLLKHIRNVRW FAD+VCDYLLGQ+ C+LYLS+RYHLLHPDYLY+RIRELQK +KLR  
Sbjct: 112 NPLLKHIRNVRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVV 171

Query: 267 XXXXXXXXXVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETLKVYEHKSADIIQGQMDT 88
                    VKPLLE+TKT++LHDCTLLC WSLEECGRYLET+K+YE+K AD+IQGQMDT
Sbjct: 172 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDT 231

Query: 87  DYMSRLTHALTSIRHVNKTDVVTLGSTFG 1
           DY+SRLTHALT+IRHVNKTDVVTLGSTFG
Sbjct: 232 DYLSRLTHALTTIRHVNKTDVVTLGSTFG 260


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  307 bits (786), Expect = 2e-81
 Identities = 158/270 (58%), Positives = 190/270 (70%), Gaps = 7/270 (2%)
 Frame = -3

Query: 789 QQREMENEKNDVNQQNKAFVIEIPSYEQVIEGNSQPKTFST-------FSQAFNFIKNSD 631
           ++ E + E++D  +   + VI+IPSY++V+E +SQ KT S+       FSQAF+F+K+S 
Sbjct: 4   EEEEKQRERDDEKKNKSSIVIKIPSYQEVLE-SSQSKTTSSLFTPSPSFSQAFSFVKSSQ 62

Query: 630 LYXXXXXXXXXXXXXXXXXXSGGINVEXXXXXXXXXXXXXSYFRPHGNSRNAILVSHRQK 451
            Y                     +                        SRNAILVSHRQK
Sbjct: 63  SYTPPPPATPPPPPPPSSRQVEQLEAPSSSSSSPSLSRS-------AQSRNAILVSHRQK 115

Query: 450 GNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFRIRELQKKFKLRX 271
           GNPLLKHIRNVRW+FADIVCDYLLGQ++CALYLS+RYHLLHPDYLY+RIRELQK FKLR 
Sbjct: 116 GNPLLKHIRNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 175

Query: 270 XXXXXXXXXXVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETLKVYEHKSADIIQGQMD 91
                     +KPLLE+T+T++LHDCTLLC WSLEECGRYLET+KVYE+KSADIIQGQ D
Sbjct: 176 VLCHVDVEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTD 235

Query: 90  TDYMSRLTHALTSIRHVNKTDVVTLGSTFG 1
           TDY+SRLTHALT++RHVNKTDVVTLGSTFG
Sbjct: 236 TDYLSRLTHALTTVRHVNKTDVVTLGSTFG 265


>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
           gi|355480123|gb|AES61326.1| DNA excision repair protein
           ERCC-1 [Medicago truncatula]
          Length = 401

 Score =  299 bits (766), Expect = 4e-79
 Identities = 157/269 (58%), Positives = 186/269 (69%), Gaps = 7/269 (2%)
 Frame = -3

Query: 786 QREMENEKNDVNQQNKAFVIEIPSYEQVIEGNSQPKT-------FSTFSQAFNFIKNSDL 628
           + E E + N +N+++   VI IPSY++VIE +    T         TFSQAF F+K+S+ 
Sbjct: 2   ENEAEKQNNSINKKSST-VIRIPSYQEVIESSQTKSTPPSLFVPSQTFSQAFAFVKSSEF 60

Query: 627 YXXXXXXXXXXXXXXXXXXSGGINVEXXXXXXXXXXXXXSYFRPHGNSRNAILVSHRQKG 448
           Y                  +   +               S  +P  N RNAILVS+RQKG
Sbjct: 61  YSPPPSLPKENAPSNASSSTPSTSSATNNAPAASPNLPNSNSQPTQN-RNAILVSNRQKG 119

Query: 447 NPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFRIRELQKKFKLRXX 268
           NPLLKHIRNVRW FAD+VCD+LLGQ +CALYLS+RYHLLHPDYLY RIRELQK FKLR  
Sbjct: 120 NPLLKHIRNVRWTFADVVCDFLLGQSSCALYLSLRYHLLHPDYLYHRIRELQKNFKLRVV 179

Query: 267 XXXXXXXXXVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETLKVYEHKSADIIQGQMDT 88
                    VKPLLE+TKT++LHDCTLLCGWSLEECGRYLET+KVYE+K ADIIQGQMDT
Sbjct: 180 LCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDT 239

Query: 87  DYMSRLTHALTSIRHVNKTDVVTLGSTFG 1
           DY+SRLTHALT++RHVNKTDVVTLG+ FG
Sbjct: 240 DYLSRLTHALTTVRHVNKTDVVTLGTNFG 268


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  299 bits (765), Expect = 6e-79
 Identities = 155/274 (56%), Positives = 187/274 (68%), Gaps = 12/274 (4%)
 Frame = -3

Query: 786 QREMENEKNDVNQQNKAFVIEIPSYEQVIEGNSQPKTFS-------TFSQAFNFIKNSDL 628
           +++ E E+    ++  + VI IPSY++V+E +    T S       TFS+AF F+K+SD 
Sbjct: 2   EKQNEEEEEQKKKKKSSVVIRIPSYQEVVESSQAKSTPSSLFVPSQTFSEAFAFVKSSDF 61

Query: 627 YXXXXXXXXXXXXXXXXXXSGGINVEXXXXXXXXXXXXXSYFRPHGNSRNAILVSHRQ-- 454
           Y                   G  +               S   P   +RN+ILVSHRQ  
Sbjct: 62  YSPPPKSRET----------GQSDAPSSTSTPSPATAAASSTIPSSQNRNSILVSHRQCI 111

Query: 453 ---KGNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFRIRELQKKF 283
              KGNPLLKHIRNVRW FAD+VCDY+LGQ +CALYLS+RYHLLHPDYLY+RIRELQK F
Sbjct: 112 ILQKGNPLLKHIRNVRWAFADVVCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNF 171

Query: 282 KLRXXXXXXXXXXXVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETLKVYEHKSADIIQ 103
           KLR           +KPLLE+TKT+MLHDCTLLCGWSLEECGRYLET+KVYE+K ADIIQ
Sbjct: 172 KLRVVLCHVDVEDVIKPLLEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQ 231

Query: 102 GQMDTDYMSRLTHALTSIRHVNKTDVVTLGSTFG 1
           GQMDTDY+SRLTH+LT++RHVNKTDVVTLG+TFG
Sbjct: 232 GQMDTDYLSRLTHSLTTVRHVNKTDVVTLGTTFG 265


>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  295 bits (755), Expect = 8e-78
 Identities = 159/274 (58%), Positives = 183/274 (66%), Gaps = 12/274 (4%)
 Frame = -3

Query: 786 QREMENEKNDVNQ--QNKAFVIEIPSYEQVIEGN----------SQPKTFSTFSQAFNFI 643
           +RE   E+ + N   QNK  +I+IPSY++VIE +          S  K   TFSQAF+FI
Sbjct: 2   EREERGEEQNTNSSNQNKKVLIQIPSYQEVIESSQVKPTQTQESSLFKPSQTFSQAFSFI 61

Query: 642 KNSDLYXXXXXXXXXXXXXXXXXXSGGINVEXXXXXXXXXXXXXSYFRPHGNSRNAILVS 463
           KNS+ Y                  S   N                       SRNAILVS
Sbjct: 62  KNSEFYSPPPPPPSKSEHGPSMASSSVQN---------------------NQSRNAILVS 100

Query: 462 HRQKGNPLLKHIRNVRWEFADIVCDYLLGQDTCALYLSVRYHLLHPDYLYFRIRELQKKF 283
           HRQKGNPLLKHIRNV+W FAD+VCDYLLGQ +CALYLS+RYHLLHPDYLY+RIRELQK  
Sbjct: 101 HRQKGNPLLKHIRNVKWAFADVVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNC 160

Query: 282 KLRXXXXXXXXXXXVKPLLEITKTSMLHDCTLLCGWSLEECGRYLETLKVYEHKSADIIQ 103
           KLR           VKPLLE+TKT++LHDCTLLC WSLEECGRYLET+K+YE+K AD+IQ
Sbjct: 161 KLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQ 220

Query: 102 GQMDTDYMSRLTHALTSIRHVNKTDVVTLGSTFG 1
           GQMDTDY SRL HALT++R VNKTDVVTLGSTFG
Sbjct: 221 GQMDTDYSSRLHHALTTVRRVNKTDVVTLGSTFG 254