BLASTX nr result

ID: Cnidium21_contig00027278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027278
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC11038.1| hypothetical protein [Camellia sinensis]               197   1e-48
ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48
ref|XP_003531068.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   191   8e-47
gb|ACU24390.1| unknown [Glycine max]                                  191   8e-47
ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   189   5e-46

>gb|AEC11038.1| hypothetical protein [Camellia sinensis]
          Length = 273

 Score =  197 bits (502), Expect = 1e-48
 Identities = 87/145 (60%), Positives = 105/145 (72%)
 Frame = +3

Query: 207 VRSGSGGSTSERVAAILTDTDVLDCAICFEPFTIPVYQCDNGHTACSSCCGKLRNKCPSC 386
           VR   G S    ++  LTD DVLDC IC E  TIPV+QC+NGH ACSSCC KL N+CPSC
Sbjct: 88  VRVSLGPSGDGSISVTLTDPDVLDCPICLEHLTIPVFQCENGHVACSSCCFKLGNQCPSC 147

Query: 387 CSPIGYNRCRALEKVLEAAKITCSNSKYGCKEKVSYSMKREHERSCVFEPCYCPLPVCHF 566
             PIGYNRCRA+EKV+E+ KI+C N KYGCKE VSYS K +HE +CV+ PC CPLP C+F
Sbjct: 148 AWPIGYNRCRAIEKVIESVKISCQNMKYGCKEAVSYSKKHDHEEACVYAPCLCPLPECNF 207

Query: 567 NGSYKDIYLHFAREHPASVTRFTFD 641
            GS + + LHF  +H  S TRF ++
Sbjct: 208 VGSSEHLSLHFTSKHSNSTTRFCYN 232


>ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|222836165|gb|EEE74586.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  196 bits (497), Expect = 4e-48
 Identities = 85/142 (59%), Positives = 106/142 (74%)
 Frame = +3

Query: 222 GGSTSERVAAILTDTDVLDCAICFEPFTIPVYQCDNGHTACSSCCGKLRNKCPSCCSPIG 401
           G S +  + A L+D +VLDC IC EP TIPV+QCDNGHTACSSCC KL++KCPSC  PIG
Sbjct: 107 GPSRNGVIYATLSDPEVLDCPICCEPLTIPVFQCDNGHTACSSCCIKLQHKCPSCTMPIG 166

Query: 402 YNRCRALEKVLEAAKITCSNSKYGCKEKVSYSMKREHERSCVFEPCYCPLPVCHFNGSYK 581
           YNRCRA+EKVLE+ K++CSNS YGCKE + YS K EH++SC   PC CPLP C++ GS K
Sbjct: 167 YNRCRAIEKVLESLKVSCSNSSYGCKESICYSKKYEHDKSCTHAPCTCPLPACNYQGSSK 226

Query: 582 DIYLHFAREHPASVTRFTFDSS 647
            +Y H   +H   +T F F++S
Sbjct: 227 RLYQHCRIKHLCDLTSFQFNTS 248


>ref|XP_003531068.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10-like [Glycine
           max]
          Length = 320

 Score =  191 bits (486), Expect = 8e-47
 Identities = 82/144 (56%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
 Frame = +3

Query: 213 SGSGGSTSER-VAAILTDTDVLDCAICFEPFTIPVYQCDNGHTACSSCCGKLRNKCPSCC 389
           +G+G ST +R V   ++D DVLDC IC+EP T PV+QC+NGH ACS CC +L NKCP C 
Sbjct: 69  NGAGTSTRDRSVPIFVSDPDVLDCCICYEPLTSPVFQCENGHIACSICCVRLSNKCPMCS 128

Query: 390 SPIGYNRCRALEKVLEAAKITCSNSKYGCKEKVSYSMKREHERSCVFEPCYCPLPVCHFN 569
            PIGYNRCRA+EKVLE  K++C N+ YGCKE +SYS K EHE+ C++ PC CP   C F 
Sbjct: 129 MPIGYNRCRAIEKVLECIKMSCPNANYGCKETLSYSKKNEHEKECIYLPCSCPFTGCDFI 188

Query: 570 GSYKDIYLHFAREHPASVTRFTFD 641
            S K+++LHF+  H  S T+FT+D
Sbjct: 189 ASSKELFLHFSHRHVGSGTQFTYD 212


>gb|ACU24390.1| unknown [Glycine max]
          Length = 320

 Score =  191 bits (486), Expect = 8e-47
 Identities = 82/144 (56%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
 Frame = +3

Query: 213 SGSGGSTSER-VAAILTDTDVLDCAICFEPFTIPVYQCDNGHTACSSCCGKLRNKCPSCC 389
           +G+G ST +R V   ++D DVLDC IC+EP T PV+QC+NGH ACS CC +L NKCP C 
Sbjct: 69  NGAGTSTRDRSVPIFVSDPDVLDCCICYEPLTSPVFQCENGHIACSICCVRLSNKCPMCS 128

Query: 390 SPIGYNRCRALEKVLEAAKITCSNSKYGCKEKVSYSMKREHERSCVFEPCYCPLPVCHFN 569
            PIGYNRCRA+EKVLE  K++C N+ YGCKE +SYS K EHE+ C++ PC CP   C F 
Sbjct: 129 MPIGYNRCRAIEKVLECIKMSCPNANYGCKETLSYSKKNEHEKECIYLPCSCPFTGCDFI 188

Query: 570 GSYKDIYLHFAREHPASVTRFTFD 641
            S K+++LHF+  H  S T+FT+D
Sbjct: 189 ASSKELFLHFSHRHVGSGTQFTYD 212


>ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Vitis
           vinifera]
          Length = 355

 Score =  189 bits (479), Expect = 5e-46
 Identities = 82/144 (56%), Positives = 104/144 (72%)
 Frame = +3

Query: 213 SGSGGSTSERVAAILTDTDVLDCAICFEPFTIPVYQCDNGHTACSSCCGKLRNKCPSCCS 392
           SGS  +    V+ ILTD +VLDC+IC EP ++PV+QC+NGH ACSSCC KL N+CPSC  
Sbjct: 92  SGSEANRDASVSVILTDPEVLDCSICLEPLSVPVFQCENGHIACSSCCTKLSNRCPSCSW 151

Query: 393 PIGYNRCRALEKVLEAAKITCSNSKYGCKEKVSYSMKREHERSCVFEPCYCPLPVCHFNG 572
           PIGYNRCRA+EKVLE+ K++C N+ YGCKE VSY  K +HE +C + PC CP   C+F G
Sbjct: 152 PIGYNRCRAIEKVLESVKVSCQNTAYGCKETVSYGKKHDHEVTCNYVPCSCPHSNCNFRG 211

Query: 573 SYKDIYLHFAREHPASVTRFTFDS 644
           S K +  HF  +H  SV RF ++S
Sbjct: 212 SSKQLAQHFRSKHLNSVIRFQYNS 235


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