BLASTX nr result

ID: Cnidium21_contig00027269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027269
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002530231.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containin...    55   4e-06

>ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|222852325|gb|EEE89872.1|
           predicted protein [Populus trichocarpa]
          Length = 721

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
 Frame = +2

Query: 2   PKSLSELKVAKTSEIYEQPTDDVMSHGKRKYQKLEEGQQGEGDISFEGPKPLSEILKRKR 181
           PKSL+ELK  K +E   Q      S GKRK+   E+    +  +SFEGP PLSEILKRKR
Sbjct: 508 PKSLAELKGGKNAEGKLQ-----QSLGKRKHS--EDNPSSDAVLSFEGPMPLSEILKRKR 560

Query: 182 GGKVAIREGGFTN--GEEHNQKKREEYLT-------------IRTEAKESNNASPSAAKN 316
            G  A    G ++   + +N K+ ++ L              I + +K+ N++     K 
Sbjct: 561 EGGAAASRSGISSVIKDNNNLKESKQSLISNSKKADAEMQSGISSVSKDDNSSQMLKNKE 620

Query: 317 EGSIPASGEVGVAEEKNKLHEGQSSLLRNTSELQ 418
           E  +   G +G  EE  ++  GQSS L N SE++
Sbjct: 621 ESKVATDGAIG-TEENIEIAHGQSSQLPNPSEIE 653


>ref|XP_002530231.1| conserved hypothetical protein [Ricinus communis]
           gi|223530235|gb|EEF32137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 591

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 60/148 (40%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
 Frame = +2

Query: 2   PKSLSELKVAKTSEIYEQPTDDVMSHGKRKYQKLEEGQQGEGDISFEGPKPLSEILKRKR 181
           PKSL+ELK  K+ E   Q      S GKRK  +L + Q  EGD+SFEGP PLSEILKRKR
Sbjct: 387 PKSLAELKGTKSIEGVMQ-----QSLGKRK--QLGDHQPSEGDLSFEGPMPLSEILKRKR 439

Query: 182 -GGKVAIREGGFTNGEEHNQKKREEYL--TIRTEAKESNNASPSAAKNEGS--------I 328
             G  A       N  + NQK+ +E L  +    A       PS  KNE +        +
Sbjct: 440 QAGVAASGSASSFNKHDDNQKESKEGLPGSPNNAAVTEIENGPSFVKNEANRQVLKDDDV 499

Query: 329 PASGEVGVAEEKNKLHEGQSSLLRNTSE 412
           P S     A E  ++  GQ S L N SE
Sbjct: 500 PKS---ATAVENTEVDLGQCSQLPNQSE 524


>ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|222863779|gb|EEF00910.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
 Frame = +2

Query: 2   PKSLSELKVAKTSEIYEQPTDDVMSHGKRKYQKLEEGQQGEGDISFEGPKPLSEILKRKR 181
           PK L+EL+  K +E   Q      S GKRKY  LE+    + D+SFEGP PLSEILKRKR
Sbjct: 523 PKRLAELRGGKNAEGKSQ-----QSLGKRKY--LEDHPPSDADLSFEGPMPLSEILKRKR 575

Query: 182 GGKVAIREGGFTNGEE--HNQKKREEYLTIRTEAK-------------ESNNASPSAAKN 316
           GG  A      ++  E  +NQK+  + LT  +  K             + +++S      
Sbjct: 576 GGGAAASGSRISSVIEDGNNQKESRQSLTSNSNNKAVAETQSGFSSVLKDDDSSQMLKNK 635

Query: 317 EGSIPASGEVGVAEEKNKLHEGQSSLLRNTSELQ 418
           E        +G      ++  G+SS L N SE++
Sbjct: 636 ESKFATDDALGTEGGNIEIVHGKSSQLPNPSEIE 669


>ref|XP_004140447.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
           [Cucumis sativus] gi|449487921|ref|XP_004157867.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           17-like [Cucumis sativus]
          Length = 721

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   PKSLSELKVAKTSEIYEQPTDDVMSHGKRKYQKLEEGQQGEGDISFEGPKPLSEILKRKR 181
           PKSL+ELK  K     EQ T      GKRK   ++   Q  G++SFEGPK LSEILKRKR
Sbjct: 521 PKSLAELKGDKHIVSKEQQT-----LGKRKGFDID---QSGGELSFEGPKSLSEILKRKR 572

Query: 182 GGKVAIREGGFTNGEEHNQKKREEYLTIR--TEAKESNNASPSAAKNEGSIPASGEVGVA 355
             K A+ +    N E  N ++  E  T     ++  S+         +G   A  E  V 
Sbjct: 573 QVKAAV-DLPINNAERDNSERSMERSTTHQLKQSVLSSTGKDETNSLDGVKSAPAETFVQ 631

Query: 356 EEKN 367
           EE+N
Sbjct: 632 EEEN 635


Top