BLASTX nr result

ID: Cnidium21_contig00027243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027243
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135611.1| PREDICTED: REF/SRPP-like protein At3g05500-l...   135   6e-39
gb|AEX97052.1| rubber elongation factor [Copaifera officinalis]       132   2e-38
ref|XP_002330158.1| predicted protein [Populus trichocarpa] gi|1...   135   5e-38
ref|XP_002283697.1| PREDICTED: stress-related protein-like [Viti...   136   1e-37
emb|CAN60820.1| hypothetical protein VITISV_033223 [Vitis vinifera]   136   1e-37

>ref|XP_004135611.1| PREDICTED: REF/SRPP-like protein At3g05500-like [Cucumis sativus]
           gi|449517347|ref|XP_004165707.1| PREDICTED:
           REF/SRPP-like protein At3g05500-like [Cucumis sativus]
          Length = 242

 Score =  135 bits (339), Expect(2) = 6e-39
 Identities = 68/118 (57%), Positives = 82/118 (69%)
 Frame = +3

Query: 3   RKVDESVHKLDSRVPLAMKQLSNRALFAAQNAPATARAVVSEVKNVNLVDTASGLAKNAY 182
           RKVDESV K+D  VP  +KQ S++A+FAAQ AP  AR+V SEV+   L D+ SG+ K+ Y
Sbjct: 88  RKVDESVTKIDRHVPPTVKQASSQAMFAAQQAPEVARSVASEVRRAGLKDSVSGIVKSVY 147

Query: 183 AKYEPAAKGLYSKYELVAEQYAASTWRSLNQLPLFXXXXXXXXXXXXYCSEKYNETVQ 356
           AKYEP+AK LYSKYE  AEQ AAS W  LNQLP+F            YC+EKYNETV+
Sbjct: 148 AKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVR 205



 Score = 52.4 bits (124), Expect(2) = 6e-39
 Identities = 22/37 (59%), Positives = 33/37 (89%)
 Frame = +1

Query: 433 ETVQRTAEQGYKISSYLPLVPTQKIAKLFSESNTQTE 543
           ETV+ +A++GYK+SSYLPLVPT++IAK+FS++  + E
Sbjct: 202 ETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEME 238


>gb|AEX97052.1| rubber elongation factor [Copaifera officinalis]
          Length = 246

 Score =  132 bits (333), Expect(2) = 2e-38
 Identities = 70/120 (58%), Positives = 82/120 (68%)
 Frame = +3

Query: 3   RKVDESVHKLDSRVPLAMKQLSNRALFAAQNAPATARAVVSEVKNVNLVDTASGLAKNAY 182
           RKVDES+ +LD RVP  +K+ S++AL AAQ AP  AR VVSEV+   +VDTASGLAK+ Y
Sbjct: 87  RKVDESMTELDRRVPTDVKKASSQALSAAQKAPEAARTVVSEVRRAGVVDTASGLAKSVY 146

Query: 183 AKYEPAAKGLYSKYELVAEQYAASTWRSLNQLPLFXXXXXXXXXXXXYCSEKYNETVQRT 362
            K EP AK LYSKYE  AE+ A S WR LN+LPLF            YC+EKYNETV  T
Sbjct: 147 GKCEPTAKDLYSKYEPKAEKCAVSAWRKLNKLPLFPQMANVIVPTAAYCTEKYNETVVST 206



 Score = 52.8 bits (125), Expect(2) = 2e-38
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = +1

Query: 433 ETVQRTAEQGYKISSYLPLVPTQKIAKLFSESNTQTE 543
           ETV  TAE+GYK+S+YLPLVPT+KIAK+F E     E
Sbjct: 201 ETVVSTAEKGYKVSAYLPLVPTEKIAKIFCEGEAAKE 237


>ref|XP_002330158.1| predicted protein [Populus trichocarpa] gi|118483115|gb|ABK93466.1|
           unknown [Populus trichocarpa]
           gi|222871614|gb|EEF08745.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  135 bits (341), Expect(2) = 5e-38
 Identities = 70/120 (58%), Positives = 83/120 (69%)
 Frame = +3

Query: 3   RKVDESVHKLDSRVPLAMKQLSNRALFAAQNAPATARAVVSEVKNVNLVDTASGLAKNAY 182
           RKVDESV  +D+ VP  +KQ+S+RAL AAQNAP  ARAV SEV+   + +TAS LAK+ Y
Sbjct: 87  RKVDESVTNMDNHVPPLVKQVSSRALLAAQNAPVAARAVASEVQRAGVKETASELAKSVY 146

Query: 183 AKYEPAAKGLYSKYELVAEQYAASTWRSLNQLPLFXXXXXXXXXXXXYCSEKYNETVQRT 362
           +KYEP AK LYSKYE  AEQ A S WR LNQLPLF            +CSEKYN+T+  T
Sbjct: 147 SKYEPTAKELYSKYEPKAEQAAVSAWRKLNQLPLFPQVAQVVVPTAAFCSEKYNQTILST 206



 Score = 48.5 bits (114), Expect(2) = 5e-38
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = +1

Query: 433 ETVQRTAEQGYKISSYLPLVPTQKIAKLFS 522
           +T+  TAE+GYK+S YLPLVPT+KIAK+FS
Sbjct: 201 QTILSTAEKGYKVSLYLPLVPTEKIAKVFS 230


>ref|XP_002283697.1| PREDICTED: stress-related protein-like [Vitis vinifera]
          Length = 238

 Score =  136 bits (342), Expect(2) = 1e-37
 Identities = 70/120 (58%), Positives = 85/120 (70%)
 Frame = +3

Query: 3   RKVDESVHKLDSRVPLAMKQLSNRALFAAQNAPATARAVVSEVKNVNLVDTASGLAKNAY 182
           RKVDESV K   +VP  +KQ+S++A+ AAQ AP+ ARAV SEV+   +VDTASGLAK+AY
Sbjct: 89  RKVDESVSKFGKQVPPVVKQVSSQAVAAAQKAPSVARAVTSEVQRSGIVDTASGLAKSAY 148

Query: 183 AKYEPAAKGLYSKYELVAEQYAASTWRSLNQLPLFXXXXXXXXXXXXYCSEKYNETVQRT 362
            K EPAAK LY+KYE VA+ YA S W SLN+LPLF            YCSE+YN+TV  T
Sbjct: 149 TKCEPAAKDLYTKYEPVAQHYAVSAWHSLNRLPLFPQVVQVVVPTAAYCSERYNQTVLST 208



 Score = 47.0 bits (110), Expect(2) = 1e-37
 Identities = 20/29 (68%), Positives = 26/29 (89%)
 Frame = +1

Query: 433 ETVQRTAEQGYKISSYLPLVPTQKIAKLF 519
           +TV  TAE+GYK+S+YLPLVPT+KI K+F
Sbjct: 203 QTVLSTAEKGYKVSTYLPLVPTEKITKVF 231


>emb|CAN60820.1| hypothetical protein VITISV_033223 [Vitis vinifera]
          Length = 235

 Score =  136 bits (342), Expect(2) = 1e-37
 Identities = 70/120 (58%), Positives = 85/120 (70%)
 Frame = +3

Query: 3   RKVDESVHKLDSRVPLAMKQLSNRALFAAQNAPATARAVVSEVKNVNLVDTASGLAKNAY 182
           RKVDESV K   +VP  +KQ+S++A+ AAQ AP+ ARAV SEV+   +VDTASGLAK+AY
Sbjct: 86  RKVDESVSKFGKQVPPVVKQVSSQAVAAAQKAPSVARAVTSEVQRSGIVDTASGLAKSAY 145

Query: 183 AKYEPAAKGLYSKYELVAEQYAASTWRSLNQLPLFXXXXXXXXXXXXYCSEKYNETVQRT 362
            K EPAAK LY+KYE VA+ YA S W SLN+LPLF            YCSE+YN+TV  T
Sbjct: 146 TKCEPAAKDLYTKYEPVAQHYAVSAWHSLNRLPLFPQVVQVVVPTAAYCSERYNQTVLST 205



 Score = 47.0 bits (110), Expect(2) = 1e-37
 Identities = 20/29 (68%), Positives = 26/29 (89%)
 Frame = +1

Query: 433 ETVQRTAEQGYKISSYLPLVPTQKIAKLF 519
           +TV  TAE+GYK+S+YLPLVPT+KI K+F
Sbjct: 200 QTVLSTAEKGYKVSTYLPLVPTEKITKVF 228


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