BLASTX nr result
ID: Cnidium21_contig00027184
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00027184 (735 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi... 182 5e-44 ref|XP_002518652.1| pentatricopeptide repeat-containing protein,... 174 2e-41 ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi... 169 7e-40 ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi... 169 7e-40 ref|NP_195906.1| pentatricopeptide repeat-containing protein [Ar... 163 4e-38 >ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Vitis vinifera] Length = 811 Score = 182 bits (463), Expect = 5e-44 Identities = 95/174 (54%), Positives = 121/174 (69%) Frame = +3 Query: 213 SQTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQALLNSNFQTDQFH 392 +QT P++P R R+R+GK +D N+GKPWS LSP GQ+ LQ L++ F Q Sbjct: 49 TQTPNPQSP---IIPRRRRRIGKSQDANRGKPWSHGRLSPPGQRILQTLIDPTFNLAQID 105 Query: 393 GILCNLFSSVEENSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEWVRNRDGLENLLDG 572 +L LF S F +SLS DVL ++KGLG++KKCD ALRVFEWVRNR E LL+G Sbjct: 106 ELLLELFEQQPGESDFSVESLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNG 165 Query: 573 SVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACASNGRYRE 734 S++AVIIS+LG+ G+VS A++L H L KDGF +DVY YTS+ITA SNGRYRE Sbjct: 166 SIIAVIISILGKGGRVSAAASLLHNLCKDGF-DVDVYAYTSMITAFTSNGRYRE 218 >ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 827 Score = 174 bits (441), Expect = 2e-41 Identities = 92/177 (51%), Positives = 121/177 (68%), Gaps = 4/177 (2%) Frame = +3 Query: 216 QTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQALLNSNFQTDQFHG 395 Q H PK N N R R R+ K +DPN+GKPW+S LS LGQQ L +L++ F+ + Sbjct: 60 QPHSPKFINPNVSIRPRTRISKARDPNRGKPWASHRLSTLGQQVLDSLIDPCFEGSELDK 119 Query: 396 ILCNLFSSVEENSCFDSK----SLSFDVLEVIKGLGYHKKCDLALRVFEWVRNRDGLENL 563 +L LF + S SLS DVL +IKGLG++KKCD+A+ VF WVR R+ E++ Sbjct: 120 VLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESV 179 Query: 564 LDGSVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACASNGRYRE 734 L+ SVVAVII+MLG++G+VS AS++ + L KDGF +DVY YTSLITA ASNGRYR+ Sbjct: 180 LNCSVVAVIITMLGKEGKVSAASSILNNLRKDGF-DLDVYAYTSLITAYASNGRYRD 235 >ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860-like [Cucumis sativus] Length = 831 Score = 169 bits (427), Expect = 7e-40 Identities = 96/187 (51%), Positives = 125/187 (66%) Frame = +3 Query: 174 QDYLLQQNSKNNLSQTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQ 353 QD L Q+ ++ +Q H PK P F RTR R+G+ DPN+GKPWS LS GQ+ L Sbjct: 59 QDLLPHQHPSSS-TQPHLPK-PTF----RTRTRIGRSHDPNRGKPWSHHRLSTQGQRILD 112 Query: 354 ALLNSNFQTDQFHGILCNLFSSVEENSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEW 533 +LLN F + IL LF + + F S S+SFD+L +IKGL ++KK +LAL VF + Sbjct: 113 SLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYF 172 Query: 534 VRNRDGLENLLDGSVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACA 713 VRNR+ ++L SVVAVIIS+LG++G+ S A++L H L DG V ID+Y YTSLITA A Sbjct: 173 VRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDG-VHIDIYAYTSLITAYA 231 Query: 714 SNGRYRE 734 SNGRYRE Sbjct: 232 SNGRYRE 238 >ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860-like [Cucumis sativus] Length = 831 Score = 169 bits (427), Expect = 7e-40 Identities = 96/187 (51%), Positives = 125/187 (66%) Frame = +3 Query: 174 QDYLLQQNSKNNLSQTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQ 353 QD L Q+ ++ +Q H PK P F RTR R+G+ DPN+GKPWS LS GQ+ L Sbjct: 59 QDLLPHQHPSSS-TQPHLPK-PTF----RTRTRIGRSHDPNRGKPWSHHRLSTQGQRILD 112 Query: 354 ALLNSNFQTDQFHGILCNLFSSVEENSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEW 533 +LLN F + IL LF + + F S S+SFD+L +IKGL ++KK +LAL VF + Sbjct: 113 SLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYF 172 Query: 534 VRNRDGLENLLDGSVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACA 713 VRNR+ ++L SVVAVIIS+LG++G+ S A++L H L DG V ID+Y YTSLITA A Sbjct: 173 VRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDG-VHIDIYAYTSLITAYA 231 Query: 714 SNGRYRE 734 SNGRYRE Sbjct: 232 SNGRYRE 238 >ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana] gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 819 Score = 163 bits (412), Expect = 4e-38 Identities = 82/162 (50%), Positives = 115/162 (70%) Frame = +3 Query: 249 SFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQALLNSNFQTDQFHGILCNLFSSVEE 428 S +R R R+GK +DPN GKPWS LSP GQQ L++L+ NF + Q +L LF ++ Sbjct: 70 SRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKD 129 Query: 429 NSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEWVRNRDGLENLLDGSVVAVIISMLGR 608 +S S ++L +KGLG+HKK DLALR F+W + +++LD SVVA+IISMLG+ Sbjct: 130 KP----ESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGK 185 Query: 609 DGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACASNGRYRE 734 +G+VS+A+N+F+ L +DGF +DVY YTSLI+A A++GRYRE Sbjct: 186 EGRVSSAANMFNGLQEDGF-SLDVYSYTSLISAFANSGRYRE 226