BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027184
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi...   182   5e-44
ref|XP_002518652.1| pentatricopeptide repeat-containing protein,...   174   2e-41
ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi...   169   7e-40
ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi...   169   7e-40
ref|NP_195906.1| pentatricopeptide repeat-containing protein [Ar...   163   4e-38

>ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  182 bits (463), Expect = 5e-44
 Identities = 95/174 (54%), Positives = 121/174 (69%)
 Frame = +3

Query: 213 SQTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQALLNSNFQTDQFH 392
           +QT  P++P      R R+R+GK +D N+GKPWS   LSP GQ+ LQ L++  F   Q  
Sbjct: 49  TQTPNPQSP---IIPRRRRRIGKSQDANRGKPWSHGRLSPPGQRILQTLIDPTFNLAQID 105

Query: 393 GILCNLFSSVEENSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEWVRNRDGLENLLDG 572
            +L  LF      S F  +SLS DVL ++KGLG++KKCD ALRVFEWVRNR   E LL+G
Sbjct: 106 ELLLELFEQQPGESDFSVESLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNG 165

Query: 573 SVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACASNGRYRE 734
           S++AVIIS+LG+ G+VS A++L H L KDGF  +DVY YTS+ITA  SNGRYRE
Sbjct: 166 SIIAVIISILGKGGRVSAAASLLHNLCKDGF-DVDVYAYTSMITAFTSNGRYRE 218


>ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542033|gb|EEF43577.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 827

 Score =  174 bits (441), Expect = 2e-41
 Identities = 92/177 (51%), Positives = 121/177 (68%), Gaps = 4/177 (2%)
 Frame = +3

Query: 216 QTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQALLNSNFQTDQFHG 395
           Q H PK  N N   R R R+ K +DPN+GKPW+S  LS LGQQ L +L++  F+  +   
Sbjct: 60  QPHSPKFINPNVSIRPRTRISKARDPNRGKPWASHRLSTLGQQVLDSLIDPCFEGSELDK 119

Query: 396 ILCNLFSSVEENSCFDSK----SLSFDVLEVIKGLGYHKKCDLALRVFEWVRNRDGLENL 563
           +L  LF    +     S     SLS DVL +IKGLG++KKCD+A+ VF WVR R+  E++
Sbjct: 120 VLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESV 179

Query: 564 LDGSVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACASNGRYRE 734
           L+ SVVAVII+MLG++G+VS AS++ + L KDGF  +DVY YTSLITA ASNGRYR+
Sbjct: 180 LNCSVVAVIITMLGKEGKVSAASSILNNLRKDGF-DLDVYAYTSLITAYASNGRYRD 235


>ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  169 bits (427), Expect = 7e-40
 Identities = 96/187 (51%), Positives = 125/187 (66%)
 Frame = +3

Query: 174 QDYLLQQNSKNNLSQTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQ 353
           QD L  Q+  ++ +Q H PK P F    RTR R+G+  DPN+GKPWS   LS  GQ+ L 
Sbjct: 59  QDLLPHQHPSSS-TQPHLPK-PTF----RTRTRIGRSHDPNRGKPWSHHRLSTQGQRILD 112

Query: 354 ALLNSNFQTDQFHGILCNLFSSVEENSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEW 533
           +LLN  F +     IL  LF +  +   F S S+SFD+L +IKGL ++KK +LAL VF +
Sbjct: 113 SLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYF 172

Query: 534 VRNRDGLENLLDGSVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACA 713
           VRNR+   ++L  SVVAVIIS+LG++G+ S A++L H L  DG V ID+Y YTSLITA A
Sbjct: 173 VRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDG-VHIDIYAYTSLITAYA 231

Query: 714 SNGRYRE 734
           SNGRYRE
Sbjct: 232 SNGRYRE 238


>ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  169 bits (427), Expect = 7e-40
 Identities = 96/187 (51%), Positives = 125/187 (66%)
 Frame = +3

Query: 174 QDYLLQQNSKNNLSQTHKPKTPNFNSFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQ 353
           QD L  Q+  ++ +Q H PK P F    RTR R+G+  DPN+GKPWS   LS  GQ+ L 
Sbjct: 59  QDLLPHQHPSSS-TQPHLPK-PTF----RTRTRIGRSHDPNRGKPWSHHRLSTQGQRILD 112

Query: 354 ALLNSNFQTDQFHGILCNLFSSVEENSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEW 533
           +LLN  F +     IL  LF +  +   F S S+SFD+L +IKGL ++KK +LAL VF +
Sbjct: 113 SLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYF 172

Query: 534 VRNRDGLENLLDGSVVAVIISMLGRDGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACA 713
           VRNR+   ++L  SVVAVIIS+LG++G+ S A++L H L  DG V ID+Y YTSLITA A
Sbjct: 173 VRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDG-VHIDIYAYTSLITAYA 231

Query: 714 SNGRYRE 734
           SNGRYRE
Sbjct: 232 SNGRYRE 238


>ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g02860 gi|7413561|emb|CAB86040.1| putative protein
           [Arabidopsis thaliana] gi|332003145|gb|AED90528.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 819

 Score =  163 bits (412), Expect = 4e-38
 Identities = 82/162 (50%), Positives = 115/162 (70%)
 Frame = +3

Query: 249 SFSRTRKRLGKHKDPNKGKPWSSFNLSPLGQQTLQALLNSNFQTDQFHGILCNLFSSVEE 428
           S +R R R+GK +DPN GKPWS   LSP GQQ L++L+  NF + Q   +L  LF   ++
Sbjct: 70  SRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKD 129

Query: 429 NSCFDSKSLSFDVLEVIKGLGYHKKCDLALRVFEWVRNRDGLENLLDGSVVAVIISMLGR 608
                 +S S ++L  +KGLG+HKK DLALR F+W   +   +++LD SVVA+IISMLG+
Sbjct: 130 KP----ESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGK 185

Query: 609 DGQVSTASNLFHKLYKDGFVGIDVYVYTSLITACASNGRYRE 734
           +G+VS+A+N+F+ L +DGF  +DVY YTSLI+A A++GRYRE
Sbjct: 186 EGRVSSAANMFNGLQEDGF-SLDVYSYTSLISAFANSGRYRE 226