BLASTX nr result

ID: Cnidium21_contig00027059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027059
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|1705...    61   8e-08
gb|AAL48207.1|AF387186_1 ribosomal protein L2 [Lonicera sp. Palm...    60   1e-07
gb|AAL48209.1|AF387188_1 ribosomal protein L2 [Ulmus thomasii]         60   2e-07
gb|AAW30346.1| ribosomal protein L2 [Platanus occidentalis]            59   4e-07
ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]              59   4e-07

>ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|170522383|gb|ACB20493.1|
           ribosomal protein L2 (mitochondrion) [Carica papaya]
          Length = 335

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = -2

Query: 312 RAKEEVGERNTFSLSDIQKWKPQSIVWAHRLKRKAAISWKTLK 184
           R KE+V  +NTFSL +++KW+  SI+WAHR+KRKAA+SW++ +
Sbjct: 209 RMKEKVRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWQSFR 251


>gb|AAL48207.1|AF387186_1 ribosomal protein L2 [Lonicera sp. Palmer 679]
          Length = 228

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = -2

Query: 312 RAKEEVGERNTFSLSDIQKWKPQSIVWAHRLKRKAAISWKTLK 184
           R +E+V  +NTFSL +I+KW+  SI+WAHR+KRKAA+SW++ +
Sbjct: 151 RMREKVRGKNTFSLCEIRKWRTHSILWAHRIKRKAALSWQSFR 193


>gb|AAL48209.1|AF387188_1 ribosomal protein L2 [Ulmus thomasii]
          Length = 246

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/43 (53%), Positives = 36/43 (83%)
 Frame = -2

Query: 312 RAKEEVGERNTFSLSDIQKWKPQSIVWAHRLKRKAAISWKTLK 184
           R +E+V  +NTFSL +++KW+  SI+WAHR+KRKAA+SW++ +
Sbjct: 181 RMREKVRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWQSFR 223


>gb|AAW30346.1| ribosomal protein L2 [Platanus occidentalis]
          Length = 217

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/40 (57%), Positives = 34/40 (85%)
 Frame = -2

Query: 312 RAKEEVGERNTFSLSDIQKWKPQSIVWAHRLKRKAAISWK 193
           R +E+V  +NTFSL +++KW+  SI+WAHR+KRKAA+SW+
Sbjct: 178 RMREKVRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWQ 217


>ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]
          Length = 331

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/43 (53%), Positives = 35/43 (81%)
 Frame = -2

Query: 312 RAKEEVGERNTFSLSDIQKWKPQSIVWAHRLKRKAAISWKTLK 184
           R +E+V  +NTFSL +I+KW+  SI+W HR+KRKAA+SW++ +
Sbjct: 205 RMREKVRGKNTFSLCEIRKWRTHSILWVHRIKRKAALSWQSFR 247


Top