BLASTX nr result

ID: Cnidium21_contig00027048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027048
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618781.1| F-box/kelch-repeat protein [Medicago truncat...    62   7e-08
ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
ref|XP_003592682.1| F-box/kelch-repeat protein [Medicago truncat...    60   5e-07
ref|XP_002516822.1| conserved hypothetical protein [Ricinus comm...    58   2e-06
ref|XP_003621455.1| F-box protein [Medicago truncatula] gi|35549...    56   7e-06

>ref|XP_003618781.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355493796|gb|AES74999.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
 Frame = -1

Query: 661 KNYDDQDSWHISAFNIANEEFSEVSPPIGVKNLSVRHLRLGVLKGCLYLMAVVKKRTELW 482
           K+ D+  SW I + ++ NE + E+  P    +  +R+  LGV + CL+++A       +W
Sbjct: 240 KDQDNDSSWVILSLDLGNESYQEILQPDYGVHQRLRYFSLGVCRDCLWVLAHTTTFLNIW 299

Query: 481 VMKEYGVVESWIKL---PFDLTRD---SQIVSLDLPEDSLVVREAGKFFL---RSSDARE 329
           VMK+YG  +SW KL   PF    D   + ++ +   +D +++   GK ++   ++   + 
Sbjct: 300 VMKDYGNKDSWTKLFSVPFKEFSDNCYAPVLFIYEEDDQVLLDFCGKLYVYNYKNGTVKI 359

Query: 328 EVIEVLGLPDKSIYRVGMTFVDTLVSP 248
             I+ L   D S       +V++LVSP
Sbjct: 360 SGIQNLAFTDFS----SNVYVESLVSP 382


>ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|222867154|gb|EEF04285.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 40/114 (35%), Positives = 63/114 (55%)
 Frame = -1

Query: 631 ISAFNIANEEFSEVSPPIGVKNLSVRHLRLGVLKGCLYLMAVVKKRTELWVMKEYGVVES 452
           I AF+I  EE+  V  P      S+ +  LGVL+ CL L +      E+WVMKEYG+ +S
Sbjct: 272 IVAFDIQREEYCTVPLPNLETKSSLYYRNLGVLRQCLSLASSSVHNVEIWVMKEYGMKDS 331

Query: 451 WIKLPFDLTRDSQIVSLDLPEDSLVVREAGKFFLRSSDAREEVIEVLGLPDKSI 290
           W+KL F L + S +    +P D      A   +++ ++   +V+ + GLPD+S+
Sbjct: 332 WVKL-FLLEKSSSLCYSTVPYDL-----APLAYVKDNNDDHKVL-LKGLPDQSL 378


>ref|XP_003592682.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355481730|gb|AES62933.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 465

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 38/138 (27%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
 Frame = -1

Query: 637 WHISAFNIANEEFSEVSPPIGVKNLSVRHLRLGVLKGCLYLMAVVKKRTELWVMKEYGVV 458
           WHI + ++  E + ++  P+  + L+   + L VL+ CL +++   K +++W+MKEYG  
Sbjct: 328 WHIVSLDLNKESYRKLLQPLYNERLNTS-ITLEVLRDCLCILSHGDKFSDIWIMKEYGNE 386

Query: 457 ESWIKL---PFDLTRD--SQIVSLDLPEDSLVVRE---AGKFFLRSSDAREEVIEVLGLP 302
           ESW KL   P+   R       S+ + ED  V+ +    GKF L   D++ + +++  + 
Sbjct: 387 ESWTKLFSIPYMEGRGFLGYCQSVYISEDDQVLMQFLKMGKFSLLVYDSKNDTLKIPEIQ 446

Query: 301 DKSIYRVGMTFVDTLVSP 248
           + +      T++++L+SP
Sbjct: 447 NVNGRMTPNTYIESLISP 464


>ref|XP_002516822.1| conserved hypothetical protein [Ricinus communis]
           gi|223543910|gb|EEF45436.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
 Frame = -1

Query: 625 AFNIANEEFSEV-SPPIGV---KNLSVRHLRLGVLKGCLYL-MAVVKKRTELWVMKEYGV 461
           AFN  NE+F E+ SP + V   K  S+  +++GVL+GCL + ++  +K +E+W+MKEYG 
Sbjct: 184 AFNFGNEQFGEIPSPSVLVSKGKKKSMGLMKVGVLRGCLCMSLSSAQKISEIWIMKEYGN 243

Query: 460 VESWIKL 440
            ESW KL
Sbjct: 244 KESWTKL 250


>ref|XP_003621455.1| F-box protein [Medicago truncatula] gi|355496470|gb|AES77673.1|
           F-box protein [Medicago truncatula]
          Length = 404

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
 Frame = -1

Query: 661 KNYDDQDSWHISAFNIANEEFSEVSPPIGVKNLSVRHLRLGVLKGCLYLMAVVKKRTELW 482
           +N  + DSW I + ++ NE + E+S P    +  V    LGV K CL ++   +    +W
Sbjct: 248 ENQKNYDSWVILSLDLGNESYQEISRPDFGLDDPVHIFTLGVSKDCLCVLVYTETLLGIW 307

Query: 481 VMKEYGVVESWIKL---PFDLTRDSQIVSLDL-----PEDSLVVREAGKFFLRS-SDARE 329
           VMK+YG   SW KL   P+          +DL      +D + +    K ++ +  ++  
Sbjct: 308 VMKDYGNKNSWTKLFAVPYAKVGYHGFGFVDLHYISEEDDQVFLHFCSKVYVYNYKNSTV 367

Query: 328 EVIEVLGLPD----------KSIYRVGMTFVDTLVSP 248
           + +++ G P           +S+Y     +V++L+SP
Sbjct: 368 KTLDIQGQPSILYNSSRVYFESLYDSSGVYVESLISP 404


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