BLASTX nr result

ID: Cnidium21_contig00027046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027046
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI22944.1| hypothetical protein [uncultured actinobacterium ...   124   1e-26
ref|ZP_07287470.1| conserved hypothetical protein [Streptomyces ...    81   3e-24
gb|ACJ83969.1| unknown [Medicago truncatula]                           87   2e-15
gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group]     86   3e-15
gb|ADI17965.1| hypothetical protein [uncultured Chloroflexi bact...    85   9e-15

>gb|ADI22944.1| hypothetical protein [uncultured actinobacterium HF0500_35G12]
          Length = 195

 Score =  124 bits (311), Expect = 1e-26
 Identities = 71/120 (59%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = -2

Query: 553 RPRLRSRLTQGRLA*PWNPWIFGGRVSHPSFATHACILTRINSTTQSPG-SFXXXXXXXX 377
           RPRL SRLT G L+ P NPW  GG VSHPS AT+  ILTR  STT S G S         
Sbjct: 76  RPRLSSRLTLGGLSLPRNPWTSGGGVSHPSLATYTYILTRARSTTVSTGASLRTRRSATT 135

Query: 376 XXTQVATASADNLSPATLSARNHLTSELLRTLSRMAASKPTSWLSTQLHILSH*VTT*GP 197
              Q +  SA +LSP T SAR+HLTSELLRTLS +AASKPTSWLS Q H + H V T GP
Sbjct: 136 PAKQESATSASDLSPVTFSARDHLTSELLRTLSMVAASKPTSWLSGQSHFVFHLVRTLGP 195


>ref|ZP_07287470.1| conserved hypothetical protein [Streptomyces sp. C]
           gi|302535772|ref|ZP_07288114.1| conserved hypothetical
           protein [Streptomyces sp. C] gi|302444023|gb|EFL15839.1|
           conserved hypothetical protein [Streptomyces sp. C]
           gi|302444667|gb|EFL16483.1| conserved hypothetical
           protein [Streptomyces sp. C]
          Length = 179

 Score = 81.3 bits (199), Expect(2) = 3e-24
 Identities = 41/47 (87%), Positives = 43/47 (91%)
 Frame = -2

Query: 358 TASADNLSPATLSARNHLTSELLRTLSRMAASKPTSWLSTQLHILSH 218
           T SA  LSPATLSARNHLTSELLRTLSR+AASKPTSWLS +LHILSH
Sbjct: 129 TTSAVRLSPATLSARNHLTSELLRTLSRVAASKPTSWLSLRLHILSH 175



 Score = 55.8 bits (133), Expect(2) = 3e-24
 Identities = 34/59 (57%), Positives = 34/59 (57%)
 Frame = -3

Query: 552 GLALGPDSPRAD*LDPGTLGYSADGFLTRHSLLMPAFXXXXXXXXXXXXXXXXTRRSPT 376
           GLALGPD P AD LDPGTL  SA  FLT  SLLMPAF                TRRSPT
Sbjct: 58  GLALGPDLPWADQLDPGTLSQSAHTFLTCVSLLMPAFSLVNRPQLASAAASPGTRRSPT 116


>gb|ACJ83969.1| unknown [Medicago truncatula]
          Length = 102

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2   SWFSPKCI*VQRCVVLVGGRALDGLGGLSAYRNQPNSEC---WQV*RGSETAGDKLRRRE 172
           SWFSPKC+  Q+    +G +   G G  S  +++        W+V   SE  GDKL RRE
Sbjct: 8   SWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYPWRVKSASEAMGDKLHRRE 67

Query: 173 GNSPDHQLRPLSGDSVGKDVELRRQPGGWLGSSHP 277
           GNSPDHQLRPL+  SV K+V ++RQPGG   SSHP
Sbjct: 68  GNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP 102


>gb|ABR26094.1| retrotransposon protein [Oryza sativa Indica Group]
          Length = 109

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
 Frame = +2

Query: 2   SWFSPKCI*VQRCVVLVGGRALDGLGGLSAYRNQP------NSECWQV*RGSETAGDKLR 163
           SWFSPKC+  Q+    +G +   G G  S  +++       + +   V   SET GDKL 
Sbjct: 8   SWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVRSASETMGDKLH 67

Query: 164 RREGNSPDHQLRPLSGDSVGKDVELRRQPGGWLGSSHP*KSA 289
           RREGNSPDHQLRPL+  SV K+V ++RQPGG   SSHP KSA
Sbjct: 68  RREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109


>gb|ADI17965.1| hypothetical protein [uncultured Chloroflexi bacterium
           HF0200_09I09]
          Length = 100

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 51/97 (52%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = -2

Query: 502 NPWIFGGRVSHPSFATHACILTRINSTTQSPGSFXXXXXXXXXXTQV--ATASADNLSPA 329
           NPW +G  VSH ++ATHA ILT   ST   P  F                 ASA  LSP 
Sbjct: 4   NPWAYGVPVSHRNYATHANILTSTRSTGGHPAGFTAAWNAPLPTAPKDDPLASAPCLSPV 63

Query: 328 TLSARNHLTSELLRTLSRMAASKPTSWLSTQLHILSH 218
           TLSA +H TSELLRTLS MAAS PTSWLS +   LSH
Sbjct: 64  TLSAPDHSTSELLRTLSMMAASGPTSWLSLRPDFLSH 100


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