BLASTX nr result

ID: Cnidium21_contig00027032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027032
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522618.1| hypothetical protein RCOM_0884570 [Ricinus c...   243   2e-62
ref|XP_002323955.1| predicted protein [Populus trichocarpa] gi|2...   241   5e-62
ref|XP_002269380.1| PREDICTED: root phototropism protein 3 [Viti...   241   6e-62
emb|CAN60915.1| hypothetical protein VITISV_002200 [Vitis vinifera]   241   6e-62
ref|XP_002310495.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61

>ref|XP_002522618.1| hypothetical protein RCOM_0884570 [Ricinus communis]
           gi|223538094|gb|EEF39705.1| hypothetical protein
           RCOM_0884570 [Ricinus communis]
          Length = 663

 Score =  243 bits (619), Expect = 2e-62
 Identities = 125/148 (84%), Positives = 133/148 (89%)
 Frame = -2

Query: 446 SNSSGGGIWKGGLHMIVAGTKDDPPPVHTKDQRMIVESLISIIPPQKDSVSCSFLLRLLK 267
           S++S    WKGGLHMIVAGTKDDPP V  KDQRMI+ESLISIIPPQKDSVSCSFLLRLL+
Sbjct: 288 SSNSSTSSWKGGLHMIVAGTKDDPPTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLR 347

Query: 266 MANMLKVAPALVTELEKRVGMQFEQAALSDLLIPSYSKSESTYDVDLVQRLLEHFLVQEQ 87
           MAN+LKVAPALVTELEKRVGMQFEQA L+DLLIPSY+KSE+ YDVDLVQRLLEHFLVQEQ
Sbjct: 348 MANLLKVAPALVTELEKRVGMQFEQATLADLLIPSYNKSETLYDVDLVQRLLEHFLVQEQ 407

Query: 86  TESSSPGRQSMYDGTQRGNNPNAKMRVA 3
           TESSSP RQS  D  QRG NPNAKMRVA
Sbjct: 408 TESSSPSRQSFSD--QRGTNPNAKMRVA 433


>ref|XP_002323955.1| predicted protein [Populus trichocarpa] gi|222866957|gb|EEF04088.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score =  241 bits (615), Expect = 5e-62
 Identities = 125/153 (81%), Positives = 135/153 (88%), Gaps = 5/153 (3%)
 Frame = -2

Query: 446 SNSSGGGIWKGGLHMIVAGTKDDPPPVHTKDQRMIVESLISIIPPQKDSVSCSFLLRLLK 267
           SNSSGG  WKGGLHMIVA +KDD P   TKDQRMI+ESLISIIPPQKDSVSCSFLLRLL+
Sbjct: 289 SNSSGGSSWKGGLHMIVAVSKDDTPTAETKDQRMIIESLISIIPPQKDSVSCSFLLRLLR 348

Query: 266 MANMLKVAPALVTELEKRVGMQFEQAALSDLLIPSYSKSESTYDVDLVQRLLEHFLVQEQ 87
           MANMLKVAPALVTELEKRVGMQFEQA L+DLLIPSY+K+E++YDVDLVQRLLEHFLVQEQ
Sbjct: 349 MANMLKVAPALVTELEKRVGMQFEQATLADLLIPSYNKNETSYDVDLVQRLLEHFLVQEQ 408

Query: 86  TESSSPGRQS-----MYDGTQRGNNPNAKMRVA 3
            ESSSP  QS     MYDG QRG NP+AK+RVA
Sbjct: 409 IESSSPTTQSFSDKHMYDGAQRGANPSAKIRVA 441


>ref|XP_002269380.1| PREDICTED: root phototropism protein 3 [Vitis vinifera]
          Length = 674

 Score =  241 bits (614), Expect = 6e-62
 Identities = 123/153 (80%), Positives = 133/153 (86%), Gaps = 5/153 (3%)
 Frame = -2

Query: 446 SNSSGGGIWKGGLHMIVAGTKDDPPPVHTKDQRMIVESLISIIPPQKDSVSCSFLLRLLK 267
           + SSG   WKGGL M+VAG KDDPP V  KDQRMI+ESLISIIPPQKDSVSCSFLLRLL+
Sbjct: 292 NGSSGSSSWKGGLQMVVAGAKDDPPTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLR 351

Query: 266 MANMLKVAPALVTELEKRVGMQFEQAALSDLLIPSYSKSESTYDVDLVQRLLEHFLVQEQ 87
           MANMLKVAPALVTELEKRVGMQFEQA L+DLLIPSY+KSE+ YDVDLVQRLLEHFLVQEQ
Sbjct: 352 MANMLKVAPALVTELEKRVGMQFEQATLADLLIPSYNKSETLYDVDLVQRLLEHFLVQEQ 411

Query: 86  TESSSPGRQ-----SMYDGTQRGNNPNAKMRVA 3
           T+SSSP RQ      +Y+GTQRGN  NAKMRVA
Sbjct: 412 TDSSSPSRQPFPEKHLYEGTQRGNGSNAKMRVA 444


>emb|CAN60915.1| hypothetical protein VITISV_002200 [Vitis vinifera]
          Length = 665

 Score =  241 bits (614), Expect = 6e-62
 Identities = 123/153 (80%), Positives = 133/153 (86%), Gaps = 5/153 (3%)
 Frame = -2

Query: 446 SNSSGGGIWKGGLHMIVAGTKDDPPPVHTKDQRMIVESLISIIPPQKDSVSCSFLLRLLK 267
           + SSG   WKGGL M+VAG KDDPP V  KDQRMI+ESLISIIPPQKDSVSCSFLLRLL+
Sbjct: 283 NGSSGSSSWKGGLQMVVAGAKDDPPTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLR 342

Query: 266 MANMLKVAPALVTELEKRVGMQFEQAALSDLLIPSYSKSESTYDVDLVQRLLEHFLVQEQ 87
           MANMLKVAPALVTELEKRVGMQFEQA L+DLLIPSY+KSE+ YDVDLVQRLLEHFLVQEQ
Sbjct: 343 MANMLKVAPALVTELEKRVGMQFEQATLADLLIPSYNKSETLYDVDLVQRLLEHFLVQEQ 402

Query: 86  TESSSPGRQ-----SMYDGTQRGNNPNAKMRVA 3
           T+SSSP RQ      +Y+GTQRGN  NAKMRVA
Sbjct: 403 TDSSSPSRQPFPEKHLYEGTQRGNGSNAKMRVA 435


>ref|XP_002310495.1| predicted protein [Populus trichocarpa] gi|222853398|gb|EEE90945.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  239 bits (609), Expect = 2e-61
 Identities = 123/153 (80%), Positives = 136/153 (88%), Gaps = 5/153 (3%)
 Frame = -2

Query: 446 SNSSGGGIWKGGLHMIVAGTKDDPPPVHTKDQRMIVESLISIIPPQKDSVSCSFLLRLLK 267
           S+SSGG  WKGGLHMIVAGTKDD P V  KDQRMI+ESLISIIPPQKDSVSCSFLLRLL+
Sbjct: 294 SSSSGGISWKGGLHMIVAGTKDDTPTVQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLR 353

Query: 266 MANMLKVAPALVTELEKRVGMQFEQAALSDLLIPSYSKSESTYDVDLVQRLLEHFLVQEQ 87
           MANMLKVAPALVTELEKRVGMQFEQA L+DLL+PSY+K+E+ +DVDLVQRLLEHFLVQEQ
Sbjct: 354 MANMLKVAPALVTELEKRVGMQFEQATLADLLVPSYNKNETLFDVDLVQRLLEHFLVQEQ 413

Query: 86  TESSSPGRQ-----SMYDGTQRGNNPNAKMRVA 3
           TESSSP RQ     +M+DGTQR  N ++KMRVA
Sbjct: 414 TESSSPSRQTFSDKNMHDGTQRSANTSSKMRVA 446


Top