BLASTX nr result

ID: Cnidium21_contig00027006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027006
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, p...   212   3e-53
ref|XP_002319987.1| ABC transporter family of the mitochondria f...   210   8e-53
gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]      210   8e-53
dbj|BAJ34488.1| unnamed protein product [Thellungiella halophila]     210   1e-52
ref|XP_002864559.1| hypothetical protein ARALYDRAFT_495937 [Arab...   206   1e-51

>ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, putative [Ricinus
           communis] gi|223527304|gb|EEF29455.1| Transporter ATM1,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 720

 Score =  212 bits (539), Expect = 3e-53
 Identities = 104/121 (85%), Positives = 113/121 (93%)
 Frame = +3

Query: 3   GAPFAWITSLSVAAYVVFTLTVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 182
           GAPFAWITS+SVAAYV FTL+VTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE
Sbjct: 290 GAPFAWITSISVAAYVAFTLSVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 349

Query: 183 HYEAERYDEFLKRYEDAALETQRSLALLNFGQNVIFSVALSAAMVLCLNKILSGEMTVGD 362
            +EA++YDEFLKRYE AAL+TQRSLA LNFGQNVIFS ALS AMVLC N I++G+MTVGD
Sbjct: 350 AFEADKYDEFLKRYEHAALKTQRSLAFLNFGQNVIFSTALSTAMVLCSNGIMNGQMTVGD 409

Query: 363 L 365
           L
Sbjct: 410 L 410


>ref|XP_002319987.1| ABC transporter family of the mitochondria family [Populus
           trichocarpa] gi|222858363|gb|EEE95910.1| ABC transporter
           family of the mitochondria family [Populus trichocarpa]
          Length = 762

 Score =  210 bits (535), Expect = 8e-53
 Identities = 103/121 (85%), Positives = 112/121 (92%)
 Frame = +3

Query: 3   GAPFAWITSLSVAAYVVFTLTVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 182
           GAPFAWITSLSVAAYV FTL+VTQWRTKFRKAMNKADNDAST+AIDSLINYETVKYFNNE
Sbjct: 332 GAPFAWITSLSVAAYVTFTLSVTQWRTKFRKAMNKADNDASTKAIDSLINYETVKYFNNE 391

Query: 183 HYEAERYDEFLKRYEDAALETQRSLALLNFGQNVIFSVALSAAMVLCLNKILSGEMTVGD 362
            YEA+RYDE+LKRYED AL+T RSLA LNFGQNVIFS ALS AMVLC + I++G+MTVGD
Sbjct: 392 AYEADRYDEYLKRYEDTALKTSRSLAFLNFGQNVIFSTALSTAMVLCSHGIMNGQMTVGD 451

Query: 363 L 365
           L
Sbjct: 452 L 452


>gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 533

 Score =  210 bits (535), Expect = 8e-53
 Identities = 103/121 (85%), Positives = 112/121 (92%)
 Frame = +3

Query: 3   GAPFAWITSLSVAAYVVFTLTVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 182
           GAPFAWITSLSVAAYV FTL+VTQWRTKFRKAMNKADNDAST+AIDSLINYETVKYFNNE
Sbjct: 330 GAPFAWITSLSVAAYVTFTLSVTQWRTKFRKAMNKADNDASTKAIDSLINYETVKYFNNE 389

Query: 183 HYEAERYDEFLKRYEDAALETQRSLALLNFGQNVIFSVALSAAMVLCLNKILSGEMTVGD 362
            YEA+RYDE+LKRYED AL+T RSLA LNFGQNVIFS ALS AMVLC + I++G+MTVGD
Sbjct: 390 AYEADRYDEYLKRYEDTALKTSRSLAFLNFGQNVIFSTALSTAMVLCSHGIMNGQMTVGD 449

Query: 363 L 365
           L
Sbjct: 450 L 450


>dbj|BAJ34488.1| unnamed protein product [Thellungiella halophila]
          Length = 725

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/121 (84%), Positives = 111/121 (91%)
 Frame = +3

Query: 3   GAPFAWITSLSVAAYVVFTLTVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 182
           GAPFAWIT+LSV AY+ FTL VTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE
Sbjct: 295 GAPFAWITTLSVGAYIAFTLAVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 354

Query: 183 HYEAERYDEFLKRYEDAALETQRSLALLNFGQNVIFSVALSAAMVLCLNKILSGEMTVGD 362
            YEAE+YD+FLKRYEDAAL+TQRSLA LNFGQ++IFS ALS AMVLC   IL+G+MTVGD
Sbjct: 355 GYEAEKYDQFLKRYEDAALQTQRSLAFLNFGQSIIFSTALSTAMVLCSQGILNGQMTVGD 414

Query: 363 L 365
           L
Sbjct: 415 L 415


>ref|XP_002864559.1| hypothetical protein ARALYDRAFT_495937 [Arabidopsis lyrata subsp.
           lyrata] gi|297310394|gb|EFH40818.1| hypothetical protein
           ARALYDRAFT_495937 [Arabidopsis lyrata subsp. lyrata]
          Length = 728

 Score =  206 bits (525), Expect = 1e-51
 Identities = 100/121 (82%), Positives = 111/121 (91%)
 Frame = +3

Query: 3   GAPFAWITSLSVAAYVVFTLTVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 182
           GA FAWITSLSV +Y+VFTL VTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE
Sbjct: 299 GAAFAWITSLSVGSYIVFTLAVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNE 358

Query: 183 HYEAERYDEFLKRYEDAALETQRSLALLNFGQNVIFSVALSAAMVLCLNKILSGEMTVGD 362
            YEAE+YD+FLK+YEDAAL+TQRSLA LNFGQ++IFS ALS AMVLC   I++G+MTVGD
Sbjct: 359 GYEAEKYDQFLKKYEDAALQTQRSLAFLNFGQSIIFSTALSTAMVLCSQGIMNGQMTVGD 418

Query: 363 L 365
           L
Sbjct: 419 L 419


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