BLASTX nr result

ID: Cnidium21_contig00026981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026981
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]          77   1e-12
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]          75   4e-12
ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|3555146...    72   4e-11
emb|CAB61221.1| cyclin D1 [Antirrhinum majus]                          72   5e-11
ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max]          69   4e-10

>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
 Frame = -3

Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRV----MTRXXX 203
           N+S++   HAE WCEGLRKE ++ CYQ +QE+ ++   RK  K LPQ+RV    + R   
Sbjct: 244 NWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPIMRSSV 303

Query: 202 XXXXXXXXXXXXXXXXXKRRRLNNSLWVDDE 110
                            KRR+LNNSLWVDD+
Sbjct: 304 SSFSASSSFSPSSSLSCKRRKLNNSLWVDDD 334


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
 Frame = -3

Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRV-----MTRXX 206
           N+S +   HAE WCEGLRKE I+ CYQ +QE+ +    RK  K LPQ+RV     + R  
Sbjct: 243 NWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRVTISRPIMRSS 302

Query: 205 XXXXXXXXXXXXXXXXXXKRRRLNNSLWVDDE 110
                             +RR+LNNSLWVDD+
Sbjct: 303 VSSFLASSSSPSSSSLSCRRRKLNNSLWVDDD 334


>ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|355514665|gb|AES96288.1|
           Cyclin-D1-1 [Medicago truncatula]
          Length = 334

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = -3

Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRVMTR-XXXXXX 194
           N+S +   HAE WCEGLRKE I+ CYQ +QE+ +    RK  K LPQ+RV  +       
Sbjct: 241 NWSLVEPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQMRVTIQPLMRSCV 300

Query: 193 XXXXXXXXXXXXXXKRRRLNNSLWVDDE 110
                         KRR+LNN LWVDD+
Sbjct: 301 SSSSSSPSSSSSSYKRRKLNNCLWVDDD 328


>emb|CAB61221.1| cyclin D1 [Antirrhinum majus]
          Length = 330

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/93 (43%), Positives = 53/93 (56%)
 Frame = -3

Query: 367 FSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRVMTRXXXXXXXX 188
           FS+I A HAE WC+GL K+NI SC + +Q +  + R +K+ K LPQ+RVMTR        
Sbjct: 239 FSFITAQHAEAWCDGLHKDNIASCIKLIQGVESNNRPKKQPKVLPQLRVMTR--ASLASS 296

Query: 187 XXXXXXXXXXXXKRRRLNNSLWVDDELETFD*G 89
                       KRR+LNNS   DD+ E+ D G
Sbjct: 297 ESSSSTSSSPSYKRRKLNNSSRADDDKESSDYG 329


>ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 348

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
 Frame = -3

Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRK-RSKALPQIRVMTR---XXX 203
           N+S +   +AE WCEGLRKE ++ CYQ +QE+ ++   RK  +K LPQ+RV TR      
Sbjct: 254 NWSVVKPENAESWCEGLRKEKVIGCYQLMQELVINNNQRKLPTKVLPQLRVTTRTRMRSS 313

Query: 202 XXXXXXXXXXXXXXXXXKRRRLNNSLWVDDE 110
                            KRR+LNN LWVDD+
Sbjct: 314 TVSSFSSSSSTSFSLSCKRRKLNNRLWVDDK 344


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