BLASTX nr result
ID: Cnidium21_contig00026981
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00026981 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max] 77 1e-12 ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max] 75 4e-12 ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|3555146... 72 4e-11 emb|CAB61221.1| cyclin D1 [Antirrhinum majus] 72 5e-11 ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max] 69 4e-10 >ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max] Length = 339 Score = 77.4 bits (189), Expect = 1e-12 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%) Frame = -3 Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRV----MTRXXX 203 N+S++ HAE WCEGLRKE ++ CYQ +QE+ ++ RK K LPQ+RV + R Sbjct: 244 NWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPIMRSSV 303 Query: 202 XXXXXXXXXXXXXXXXXKRRRLNNSLWVDDE 110 KRR+LNNSLWVDD+ Sbjct: 304 SSFSASSSFSPSSSLSCKRRKLNNSLWVDDD 334 >ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max] Length = 339 Score = 75.5 bits (184), Expect = 4e-12 Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Frame = -3 Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRV-----MTRXX 206 N+S + HAE WCEGLRKE I+ CYQ +QE+ + RK K LPQ+RV + R Sbjct: 243 NWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRVTISRPIMRSS 302 Query: 205 XXXXXXXXXXXXXXXXXXKRRRLNNSLWVDDE 110 +RR+LNNSLWVDD+ Sbjct: 303 VSSFLASSSSPSSSSLSCRRRKLNNSLWVDDD 334 >ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|355514665|gb|AES96288.1| Cyclin-D1-1 [Medicago truncatula] Length = 334 Score = 72.4 bits (176), Expect = 4e-11 Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Frame = -3 Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRVMTR-XXXXXX 194 N+S + HAE WCEGLRKE I+ CYQ +QE+ + RK K LPQ+RV + Sbjct: 241 NWSLVEPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQMRVTIQPLMRSCV 300 Query: 193 XXXXXXXXXXXXXXKRRRLNNSLWVDDE 110 KRR+LNN LWVDD+ Sbjct: 301 SSSSSSPSSSSSSYKRRKLNNCLWVDDD 328 >emb|CAB61221.1| cyclin D1 [Antirrhinum majus] Length = 330 Score = 72.0 bits (175), Expect = 5e-11 Identities = 40/93 (43%), Positives = 53/93 (56%) Frame = -3 Query: 367 FSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRKRSKALPQIRVMTRXXXXXXXX 188 FS+I A HAE WC+GL K+NI SC + +Q + + R +K+ K LPQ+RVMTR Sbjct: 239 FSFITAQHAEAWCDGLHKDNIASCIKLIQGVESNNRPKKQPKVLPQLRVMTR--ASLASS 296 Query: 187 XXXXXXXXXXXXKRRRLNNSLWVDDELETFD*G 89 KRR+LNNS DD+ E+ D G Sbjct: 297 ESSSSTSSSPSYKRRKLNNSSRADDDKESSDYG 329 >ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max] Length = 348 Score = 68.9 bits (167), Expect = 4e-10 Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 4/91 (4%) Frame = -3 Query: 370 NFSYINAGHAELWCEGLRKENIVSCYQRVQEIWVSTRLRK-RSKALPQIRVMTR---XXX 203 N+S + +AE WCEGLRKE ++ CYQ +QE+ ++ RK +K LPQ+RV TR Sbjct: 254 NWSVVKPENAESWCEGLRKEKVIGCYQLMQELVINNNQRKLPTKVLPQLRVTTRTRMRSS 313 Query: 202 XXXXXXXXXXXXXXXXXKRRRLNNSLWVDDE 110 KRR+LNN LWVDD+ Sbjct: 314 TVSSFSSSSSTSFSLSCKRRKLNNRLWVDDK 344